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00:00 All right. So then we start Peers for reals. Um Remember to

00:08 that number in your um app uh , for, for this to

00:16 You gotta have obviously a register. . Um All right. The uh

00:25 today, well, this week's over much after today, but you got

00:30 first can quiz. Um Tomorrow opens noon. Ok. You got through

00:37 completed. Um Just remember that you um whenever you start, you start

00:46 Friday, you can start it on . It doesn't matter, but when

00:49 do your ticks. So you don't you can start it on Saturday morning

00:54 finish it Monday start, ok? But it's not a, it's not

01:01 lockdown browser thing. You can, can you take a whole class at

01:06 time? You can do that completely to you. Um The first mastering

01:13 is due on Monday as well. . So, um OK. Uh

01:22 else? Um Any questions above Ok. So, uh we're gonna

01:31 with, so remember we had a last time. That was one of

01:41 before and after attempts, right? , uh you're gonna see who's playing

01:47 the, but you all selected last in terms of your answer. So

01:52 we're looking to do it now now the after. OK. So that's

01:57 one here. So same question as . OK. Uh But another shot

02:02 its so is the majority answered? , whatever the majority answer last time

02:12 wrong. So I'll tell you that . OK. So we have the

02:23 . Mhm And nobody ever talked about to do that. It's a common

02:30 in div oh A big Yeah. trying to collaborate. Maybe one.

03:14 . Yeah. All right. Let's down from seven. See.

03:30 OK. There we go. Fine, good. OK. So

03:43 mines were swayed. Let's see. we increased the correct answer to from

03:54 to 1 16. OK? Because is correct. OK. So somebody

04:02 me or why? So who's uh who answered? Somebody answered f who

04:08 F So why is he wrong? . Yeah. Antibodies, right.

04:16 vaccines where by stimulating your body to antibodies? They respond to antigens to

04:23 that, right. So um So after, after for those,

04:29 those little tropes, OK. So just a brief recap. And the

04:36 thing we gotta do today to finish Checker one is the EIE ID emerging

04:40 disease. So uh so we last we went through uh pasture and his

04:47 through his um kind of a design that have air in the trapped

04:53 So he will fill the with, the a people. So you gotta

04:58 rid of air and then he get generation. So he had air but

05:02 spontaneous generation, right? So um we talked a little bit about

05:10 Uh We didn't go, we don't into like your book. It,

05:13 only briefly mentions Popes postulate, So the whole framework for how you

05:20 a microbe to a disease, We we go, we go through

05:25 in in middle of semester chapter we'll go through all the nuts and

05:29 of that. But uh for now to know that um his finding was

05:36 that microbes could cause disease. That's he established, right? Not all

05:41 , obviously, because not all diseases infectious diseases like cancer, heart

05:46 So don't, don't apply here, certainly infectious diseases. He established that

05:52 could be caused by microbes and that's he was able to work with.

05:55 . And so both test drive, know, all that work kind of

06:00 in developing the techniques of microbiology that beginning to learn lab. If you're

06:04 lab, uh a lot of people call basic stuff, but it's,

06:09 know, it's it's their ability to these things is what really revolutionized the

06:15 . So as a big technique bringing on liquid and so media, et

06:19 . OK. So and then we through uh so OK, you find

06:25 that micros and causes these one. how do you get rid of

06:27 Right. So that vaccination and such , antibiotics, et cetera,

06:33 And so, uh the basis for right is about recognizing antigen,

06:39 Antigens are on microbes in various whether it's molecules sticking out of the

06:46 , um whether it's element that's flopping anything on the periphery, potentially your

06:52 system cells can detect. And so detection of anakin leads to several effects

07:00 we'll learn later. But one of for a big production antibody and so

07:06 and it itself has a number of that have hurt. OK.

07:11 the, the goal is to the result is to get rid of

07:14 get rid of that. OK. so, uh then we ended pretty

07:19 on, no, we ended ended with that. But we,

07:22 the end, we talked about significance our COVID. So obviously, in

07:28 course, we're really hammering on the care aspects for the microbes and uh

07:33 bad ones that cause the disease and we diagnose and how we treat

07:37 blah, blah, blah. Um what we spend most of the

07:40 So I do wanna spend, we a little bit here, but we'll

07:43 a little bit more time down the about some of the good things,

07:47 ? Because that's far, far, , far, far out. But

07:53 , we need, we need them our own. OK. And so

07:57 , they're different metabolisms that they have are able to really uh bring about

08:03 cycling of elements, right? Where all need things like carbon uh

08:09 phosphorus, et cetera to make our and they make these available through decomposition

08:17 their types of metabolism they have. so that supports everybody in here.

08:24 . You include it. So um know that there was, the guy

08:29 to gray kind of found these kind little metabolisms, eating inorganic materials.

08:36 never heard of that? Yeah. um and then we finished up

08:42 with a little bit of uh micro disease. So my provider was in

08:49 on you, right? And um relationships you have with them are typically

08:55 two the mental relationship uh they benefit they don't harm you. So there

09:03 kind of passengers along for the ride they don't do anything to you but

09:07 of course, can, can, uh can harm you type. Of

09:13 you both are benefit. So uh number of these relationships. So most

09:19 the uh the side. So where , that they, their metabolisms

09:26 you think like vitamins, you wouldn't make amino acids, you wouldn't otherwise

09:31 um um uh boosting your immune system not functioning in many different ways.

09:40 ? So lots of things to Then, of course, there are

09:43 I opportunistic um really about these ari types arise from your, your own

09:55 bike. Typically in scenarios where they're the chance to kind of get out

10:02 the habits that they normally live Basic example, is staff,

10:07 Staff are live on your skin or membranes, your nose, for

10:12 uh because they have, if they a way to like get into your

10:16 like a wound or something like then that's where they make some,

10:19 may cause problems. OK? Uh pas aren't normally live on.

10:25 If you have it acquire uh uh not that you, you would have

10:35 as part of the microbiome, So that would that, that would

10:42 um from health care standpoint, bio are all about its surface.

10:51 Hold on trying to get this thing . Oh I got it back out

10:55 just one second because if you get power point, you got a

11:02 you have to have it on presented speaker full screen or your pen will

11:07 . OK. Uh Fy I if ever do this, OK. Let's

11:14 . There we go. So bio . How about surface grow on the

11:23 , the earth and grow and OK. And so maybe you mentioned

11:28 surfaces you might encounter a health care , right? A uh breathing

11:35 a meter or some kind of body , the joint, they don't all

11:41 surface in the heart valve. Um all those surfaces where where can grow

11:50 if you don't handle it properly, come from your skin uh or not

11:56 when you open the packaging, you contaminate. You need to buy a

12:01 . So we'll talk more about that as well. OK. So that

12:04 us with the last thing um E Ds. OK. Um And so

12:10 just wanna show a quick quickie uh here, but I don't know,

12:19 back up to the audio in So let me just try this real

12:24 shame. You got try this All right. So let's look at

12:36 . Oh, no problem. OK. Sorry about that. Let's

12:41 here. That was crazy with several diseases. Diseases pose a threat to

12:48 health worldwide. One such example is ignore the virus outbreak in West

12:53 He claims thousands of lives and caused around the world virus outbreak. It

13:00 rapidly throughout the Americas and affected thousands people, especially pregnant women. There

13:06 also diseases like COVID-19 that emerged in . It has become a global pandemic

13:13 widespread illness, death and social Why are we seeing an increase in

13:19 infectious diseases? One reason is the interaction between humans and animals deforestation.

13:27 so um just to interject here, , let's try again. Here we

13:33 . So just to mention here, E I Ds um seemingly coming from

13:39 and all of a sudden boom, got this outbreak. OK. Um

13:45 often these are diseases we've known But when they were first discovered or

13:51 , um it was like on a small scale, right? And maybe

13:55 obscure region of the world they maybe , oh, this unusual organism

14:00 or, or, or virus or bacterium but never really kind of

14:04 anything. But then years later it a full blown infection. Ok.

14:11 became more virulent. Virulent is kind severity of disease. So cold virus

14:17 not that virulent, right? It's that deadly, but something like Ebola

14:21 super virulent. Ok. So it may have been a more benign

14:27 , but then all of a sudden morphed into this more infectious type.

14:32 ? Um so and and more and of these E I DS tend to

14:38 viruses. Ok? Not exclusively but often the case. OK? And

14:44 the animal connection as mentioned. And um zoonotic diseases are of animal

14:52 OK? And uh COVID uh um uh SARS virus, the the the

15:02 virus, um all all related all organs and bats. Ok. And

15:09 and so one of the other uh human interaction, it because viruses,

15:15 , even it's not a virus. it has to make a transition to

15:18 human, right? It's gonna affect , right? Just because an animal

15:21 mean it automatically affect us, So it's all about we'll learn the

15:27 uh interaction in in particular is about particular molecules on their cell that allow

15:33 to gain interest inside and they are gonna have that they're used to being

15:39 whatever animal is their host and they'll it themselves. So when it,

15:45 course a uh viruses, other they can mutate change, right?

15:52 that pattern and then be able to yourself. But, but you've gotta

15:57 the interaction between the two, It can't just my do on,

16:01 its own, it contact between humans animals that, that the organism kind

16:05 learns some like the, the human how to, how to breach the

16:10 uh barrier to get in there. ? And that's happening more and more

16:14 said through for like getting into because are expanding, getting into clearing areas

16:20 get in there and, and housing whatnot. And so you're gonna

16:23 you know, different types of insects, what have you,

16:27 Um Also our, our, our markets, right could be um uh

16:36 in Southeast Asia and other parts of world. And so you'll have,

16:39 know, animals, different types, cage, caged up for sale and

16:45 interaction. I saw one video of park in India that had uh facilities

16:50 they have like a lot of bats there's things around in this, in

16:54 country, just different parts of the States, there are stuff we eat

16:58 here, they don't eat up right. Crawfish, it's not that

17:02 , I don't think in Minnesota, it is here. Ok. But

17:06 other foods say that around the world are eating that we don't eat and

17:09 are where, you know, for example, are eaten. And

17:13 , that's kind of that, that brings the human connection and potential for

17:18 not. Ok. So, um just move forward, increasing the risk

17:26 disease, transition, political travel and also contribute to the spread of diseases

17:32 the border. Changing climate is an factor. Well, that's definitely

17:39 So climate change um is in terms like especially insects, insects are a

17:45 of, of vectors. Vector is name for uh a a an animal

17:50 that is specific for carrying a specific and transmitting a tooth, right?

17:56 insects mosquitoes in particular are very common uh with Nile virus. Um and

18:02 others and climate change can lead to temperature differences now or maybe insects,

18:10 example, like warmer climates that now getting warmer in areas that weren't so

18:15 before that they can then migrate to areas and now they can occupy those

18:19 . They couldn't before same that migratory of other mammals can carry different vectors

18:24 things. So uh that can effect , increase the the interest perhaps of

18:31 spreading these types of E I OK. Natural habitats need to stop

18:38 balance, making it easier. Also the risk of Zinno diseases, the

18:56 crowding, whether it's crowd, crowds humans or animals, what not that

19:01 accelerates the ability to transmit, transmit the organism. So amazing,

19:08 as to develop new vaccines and therapeutics combat these diseases, improve public

19:16 infrastructure and surveillance systems are necessary to effectively. She win this campaign,

19:26 hygiene practices such as hand washing and food. We must also address the

19:33 factors that drive the emergence of these , climate change and unsustainable farming

19:43 I OK. So um let me . OK. So um yeah,

19:54 it, you know, in the we live in now, you

19:56 we travel everywhere and um uh more humans are occupying the planet crowding

20:03 . Uh climate change, all these gonna play factories, likely increase the

20:09 of having another outbreak. Uh hopefully pandemic wise, but certainly, uh

20:16 , I don't think COVID the last we may go to this but

20:20 that we did a couple of years . But um that's why it's all

20:24 more important to have people out there scientists out there on the front

20:28 out in areas of the world monitoring populations for these kind of things.

20:33 it's, it's uh obviously important to to get ahead of this before it

20:39 something and contain it when there is outbreak. OK. So, you

20:44 , so it really um the last here is you know, beyond these

20:49 of, of cultural and environmental factors so far. Right. Um,

20:58 you know, the actual organism itself , uh, because a particular factor

21:04 COVID environment but itself change you all . That's what it's all about.

21:10 so the, uh, you can . So, viruses, in particular

21:15 A viruses like COVID is, and other viruses. RN A virus,

21:21 virus are all we call RN A And these tend to mutate much

21:27 Ok. Uh DNA viruses less. , um I'll get into why that

21:34 we're talking about viruses but, but don't do that. Um uh Of

21:39 . So, um and then in process of creating new genes for acquiring

21:49 means, uh again, all, the agent has to give you a

21:54 , you just gotta be able to , I think that human itself,

21:59 ? And then gain interest and begin replicate. OK. So it doesn't

22:04 a lot of, it doesn't require to be. Uh so when the

22:13 , for example, two virus, practice the cell, you have more

22:18 . In fact, it is uh canine inside itself and that's how flu

22:26 evolve from like uh the bird flu flu, uh et cetera, these

22:31 variants kind of recombined with each Ok. Uh So, you

22:36 it's uh it is a definitely it's uh something to be aware of

22:43 sure and to have and to be and, um, uh, making

22:49 that, you know, we find before it gets too bad and contain

22:53 . Ok. So it's something we're be dealing with, you know,

22:55 the foreseeable future. Ok. any questions? But I think so

23:03 gonna flip. So this next next chapter is all about the.

23:09 . So it's gonna be a lot , ok, here's what's in the

23:11 cell and this is what it OK. OK. So um a

23:18 good test for this is um if , like I said, if you

23:27 to assess yourself on the knowledge of that topic, right? Simply

23:31 draw a huge cell on your call that a bacterium x whatever your

23:39 name is and then proceed to fill up with what you know about.

23:46 , starting from the outside and going . OK. What do you encounter

23:54 along the way? OK, So now you do that, of

23:59 , the pen and pencil and nothing . So if you can do that

24:03 the, at the end, you be pretty confident. OK. So

24:09 gonna do it in a similar fashion . OK. So with her

24:16 remember the bacteria? OK. So the various types of arrangements of

24:23 you'll see this stuff in lab when in there. Uh There's different terminology

24:28 these types, whether it's facilities, shape, they can be chains,

24:33 have single from, you know, to chemo Morph relates to kind of

24:45 non a non uniform you can see the py, right, they're all

24:52 rod shaped in chains, but they're uniform. Uh All these vibrio are

24:57 shape. Uh The spy are all shaped but pleomorphic is kind of the

25:03 of that. They kind of have irregular forms forms. That's classic

25:08 OK. The point is you can different arrangements and there's terminology associated with

25:12 means chains, coccus circular shape, stas with these great light plus.

25:21 . So that's characteristic of bacteria, . OK. So let's look at

25:26 question. Are before and after I'm get one of these again,

25:30 So we'll see this in a little . So which is false among eight

25:38 concerning this bacterial cell. OK. look carefully and all those little here's

25:46 . OK. So key, key here is bacterial cell. OK.

26:21 . Mhm. Mhm All right. count down from 25. OK.

26:57 right. 543. Yes. Like , let me take a picture of

27:12 . All right. Is that Hm. OK. Let's move

27:21 We'll come back to that little few from now. OK. So uh

27:25 know, your book does, but don't focus on itself. OK.

27:30 emphasis is pro Caros. So when do show something from you, I'm

27:36 gonna test you on that left side . OK. It's for comparison,

27:42 ? So, um so just keep in mind as you're going through chapter

27:47 , OK? That you're not gonna testing on new periods, right?

27:50 you know what you're gonna be tested because it's on the exam one

27:53 right? So just follow that. . So just comparatively speaking,

27:58 there's obviously a difference between inside the of the cell, right? All

28:03 membrane folding, the nucleus, et , characteristic of way you carry

28:07 right? Protic cell doesn't have OK. Uh That type of membranes

28:16 organelles or folding or whatnot. They've an area containing the chromosome, right

28:23 08 is the key term is not , void, basically means is is

28:28 like OK. But it's not it's not a membrane bound structure.

28:34 . So um I'm gonna, I no uh different. I'm gonna show

28:39 this just for uh just let's go . OK. So again, basic

28:45 , I think you can probably write list already of basic differences between the

28:49 and pro Caro. OK. Uh you see here, uh all the

28:53 of instructions you see compared to a Caro. And obviously it is not

28:57 scale. This would be a much fraction of the size of the cell

29:01 the right. OK. So um main thing, pro nuclear region,

29:14 ? It's not membrane bound, it's a new leaf, that's the

29:21 Um All these, we see some that will have like structures in

29:27 but they're not membrane bound organelles. uh They do have cell wall,

29:33 of them do, but it's not wall like a, like a

29:36 It's different. Um Of course, like the Bible binary excision, there's

29:40 sexual reproduction in a bacterium or right? So, uh and a

29:47 is basically we have 46 linear right? We inherit 23 from each

29:55 . OK? Um And that's typical your current cell linear straight in that

30:02 chromosomes in multiple. OK. So most eukaryotes are diploid. OK.

30:11 can be some variations. We're diploid and IKE are haploid one chromosome,

30:17 circular chromosome. OK. So this area here is occupied by one single

30:25 chromosome you can have uh but we'll that on the next picture.

30:30 So let's move ahead this question right? So about molecules that make

30:36 a cell, right? So here about abundance, abundance of molecules.

30:43 um so in a pro Caro the abundant molecule numbers of them.

30:54 Um Would be what? So when see abundance stick in terms of quantity

31:00 molecules per set. OK. One these are molecules for cell, don't

31:08 about it. Let me cover it . I need you to see

31:10 Yeah. Beep. OK. OK. All right. Let's count

31:34 for 21. Mhm uh Hint is the most abundant molecule in anything in

31:53 living thing. Yeah, I hear changing answer is changing. Yes,

32:07 . We are molecules. We're, all 70% water. What's the,

32:18 isn't a quicker question. What's the abundant on? What's the least abundant

32:23 the list? Molecules per cell? see you tonight. DNA? There's

32:34 circular DM. I, you Ok. One. Ok.

32:41 so collectively don't need to know But DNA, ah, DNA,

32:48 RN A, what we call like molecules. That's about 25% of the

32:55 . OK? Um lipids fats 0 something like that. Uh But

33:02 so water molecule is most abundant. Let's look at the Malibu cell

33:08 bacterial cell. OK. So this envelope, OK. Um Get out

33:17 the habit of referring to the bacterial , I guess maybe as a cell

33:25 , right? Use the term OK. So here you see that's

33:31 to be a cytoplasm memory. We it inner membrane. We'll talk about

33:36 because many bacteria have stuff beyond So we refer to the inner membrane

33:44 that that initial barrier that defines it a cell, right? Cytoplasmic membrane

33:51 membrane. However, you wanna refer , right? That's the one that

33:56 the cytoplasm. OK. Now the we say envelope, what's the envelope

34:02 refers to really here outwards OK. it'll include the cell membrane in a

34:11 . OK? But whatever else is there and we'll see there can be

34:14 stuff that's out there. So, you say cell envelope of the

34:18 you say, well, it's, got the inner membrane, of

34:21 but then it's got blah, blah blah. OK. So when

34:25 say cell envelope, that's, that's that term refers to. OK.

34:29 um OK. So in your you probably are familiar with membrane structure

34:35 fossil libid and whatnot. That's what gonna see here. OK. Um

34:39 well as the various proteins for et cetera. OK. OK.

34:44 . So basically everything inside there is cytoplasm. You have cytoplasm, we

34:50 cyzone. So cyzone is basically just lid portion, the a portion of

34:54 pla the cytoplasm is basically everything that's the cell, it's inside that

34:59 OK. Which you can imagine already that is, right? All the

35:04 molecules, DNA RN A et cetera . OK. So the nuclear,

35:11 grave parents. So if there's no to really without you thinking that there

35:20 that this might be a mem, ? It's not, it's not a

35:24 , it's just an error and it's the way to draw it without,

35:28 know, kind of bring that. it's, it's just an error.

35:31 not, it does not represent, not represent a membrane which is represents

35:37 area occupied by the chromosome and we it a nucleoid. OK. Um

35:47 , the the number one function in cell, including you, yours is

35:52 proteins and be doing that on ribosomes gonna have a ton of ribosomes in

35:57 cell and they're, they are uh can be, you know, a

36:04 about microscope, you know, with little bit with 1000 X, but

36:10 they have do have some size to , OK. But nonetheless, that's

36:16 . So um let's see. So back to the cell envelope.

36:23 , the cell envelope for most bacteria a cell wall. OK? So

36:30 can be thick, it can be . OK. We'll get into the

36:33 of the cell wall here shortly. . So the point is it's not

36:37 on the cell, it's made this look like. OK. And so

36:43 so gram positive version is gram OK? Very easy to distinguish

36:49 right? The ram native is the cookie. Basically, it has

36:54 the cookies are the two layers in middle white layer is is the cell

37:00 actually has two membranes. It has inner and an outer membrane and a

37:04 . OK? Very thin, very , very thick cell. OK?

37:09 just it resides on that inner OK. So uh we'll talk more

37:17 that later. OK. Now, most bacteria have one or the other

37:24 positive but there, there's certainly plenty don't have a cell wall.

37:30 But more do than don't. IKEA, it's probably like 50 50

37:35 terms of a cell wall. I . So OK. Um And the

37:39 cell wall is also similar to but exactly like pepper the like him.

37:45 , but yeah, we'll mention that a little bit uh Right. So

37:50 things, OK, these little circles kind of a circle over um these

37:57 the DNA, that's DNA, And so you can have a pro

38:04 have um uh the chromosome, the DNA, we can have these

38:11 chromosome in addition to the chromosome, pieces of DNA and circles we call

38:21 . And so these are segments are entities that can be changed exchanged

38:27 cells transport between cells. OK. talk about that in uh you need

38:34 . And so a cell can inherit and you can donate plasma to other

38:39 . So um it's a way for to acquire different genes. OK.

38:45 you can have the chromosome, then can have plasm the totality when we

38:50 about both of these together, that's cells genome. Yeah, the genome

39:02 anything is the totality of DNA. genome consists of 46 chromosomes. This

39:09 could be the one chromosome plus however plasmas it's got OK. It's,

39:13 , it's all this genetic information. . Um OK. So external

39:21 So going outside this structure, like uh attachment uh also uh kind

39:34 a weird kind of motion. You do a cruise type of motion as

39:37 . OK. Talk more about these a little bit uh flagellum fla.

39:44 you can have very different, they different arrangements. They can be all

39:49 the cell on just one end, can be a bunch of at one

39:53 . And what have you obviously it motion capsule. So you see the

39:59 blob show up that's an outer a thick outer layer. So many

40:06 , pathogens are disease causing microbes can a thick capsule on it.

40:10 That capsule basically covers. So any of molecules here on the surface of

40:16 bacterium are now covered. It has capsule. That's one of the a

40:22 bacterium that's a pathogen. That's one the ways it can avoid your immune

40:27 , right? So the capsule is covering the energy. So your cells

40:32 see them that well. So it's common feature of many pathogens that they

40:39 an organism you got vaccinated for is of those very thick capsule. Uh

40:45 bacteria, streptococcus pneumonia comes with obviously very thick act. So you

40:49 see this uh very uh micro is just a generic term that describes kind

40:58 this. If it, if there's outer layer, it's not just a

41:02 , but it could be like just of slimy extra Saar material that's stuck

41:06 it. That that's also called it it's kind of this material that external

41:11 the hm uh out of membrane for long. Ok. So um so

41:21 other thing here bring it back kind in the context of clinical medical microbiology

41:29 . OK. So the that this what a pathogen has that enables it

41:37 cause disease. Ok. And so uh what we see in this page

41:45 , what could be various factors? , pill and could be real

41:49 A flagellum could be a factor. uh There are certain components of the

41:57 wall can be factors. It's anything enables it to cause disease, things

42:02 being able to stick to your cells producing a toxin, although you don't

42:07 it here. Uh but toxins can to. Um so again, anything

42:14 will enable it to cause disease is real factor. OK. And we'll

42:18 about that second half of the OK. So um a capsule is

42:24 real factor. OK. So I say like can be uh a capsule

42:31 be a real factor. Plage flagella can be a real factor. So

42:36 just depends. OK. So, so now it's kind of break

42:42 we'll go individually through these various structures a little little bit more detail.

42:48 . So the, the approach here the book is let's start outside and

42:54 go in. All right. So just mentioned glycolic. And so

42:58 it's kind of a generic term for . Uh it can be. So

43:03 the basic 35 capsules, fine layer a bio, right? So the

43:11 slime layer is really a loosely Uh I can get to call

43:20 But you often see it uh as byproduct of metabolism, it, it'll

43:26 some metabolic byproducts and maybe it's kind a sugary car carbohydrate mixture. And

43:34 it's kind of sticky, it just on to the outside of the

43:38 OK. That's really where the slime is. OK. It, it's

43:42 , it's not a gene encoded feature capitalism. Right? Again, is

43:49 of really just a byproduct of right? And these things just secrete

43:53 of the cell and get stuck to and it could by, by being

43:57 to the cell, it could maybe in some ways. It's not a

44:01 structure that's always there necessarily. And there it should be just part of

44:06 byproduct of metabolism. OK. That's of how I think about that.

44:11 capsule is tightly integrated structures. You see it's tightly bound to that

44:19 OK. There's a capsule stain. the the clear areas are the a

44:25 here are the cells are pink and clear area is the capsule, it

44:29 be quite thick. OK. The can't penetrate the capsule. And so

44:34 uh so the these aren't gene encoded . OK. So it's for the

44:39 of uh covering this cell. And , if you see a capsule,

44:43 usually in the, in the associated a, with a pathogen typically of

44:47 sort, right? Um phagocytosis is your immune system cells way of

44:56 rid of packages, it engulfs I think you're probably all familiar with

45:00 and having to cancel it actually kind makes it less able to be.

45:04 it has a number of features that it to, to avoid your immune

45:09 . And so finally, we talking biofilms briefly last time. But so

45:14 are a collection of bazillions of, bacteria, ok? But part of

45:19 process is to make a decree and it all together. OK. So

45:29 is material that's on the outside of cells and they are produced, produced

45:34 by the cells. OK. Um . So capsule slime layers and

45:41 all right. Um So let's look led quickly. So um from,

45:52 the ear is much different in terms structure and how it moves.

46:02 So these ways visualize this is a plume is a propellant. So it

46:08 it winds like this. OK. eyo flagellum is more like a

46:15 It does this kind of motion, ? Not rotating more like this.

46:21 . So very different. And uh structure of a bacterial plume is actually

46:26 simpler as well. OK. And it has uh this structure that rotates

46:32 it's called a hook. OK. this is anchored in by this what's

46:37 the basal body in the membrane, ? This is actually a a gram

46:43 . And I can say that because gram negative has a inner membrane and

46:47 membrane and here will be the cell . We'll talk about that shortly.

46:50 nonetheless, but it's positive, negative of itself. OK. So,

46:57 of course, it's flagellum protein units make it up. And the uh

47:04 here we're talking about which is associated the flagellum. We also have what's

47:10 the o antigen. OK. o antigen H and so this comes

47:18 proof uh 50 60 years ago or uh was developed this system.

47:25 Really for identification purposes. And it around this because it can produce an

47:33 response. So a the immune response O A is associated with the out

47:42 memory. OK. So this was developed for brand natives, like your

47:47 coli and your salmonella and for disease types. OK. So we've got

47:55 an two various types of all kinds E coli H A&E coli,

48:03 OK. And so it's a, a way if you identify the more

48:08 important types. For example, you have heard of E coli 0157.

48:18 . I call it the Chipotle. , and they've had a number of

48:24 in the last three years, typically with produce lettuce, et cetera,

48:29 with life intestinal uh disease. Um the o we can identify from the

48:39 to this. So they pretty much need it for, that's kind

48:49 that's what that's about. OK. These are what we call uh serological

48:57 that involve like antibody engine reactions. very common nowadays in terms of

49:04 to use antibodies uh to, to ID, we have, we have

49:09 to so many different patterns. It's way to rapidly ID very quickly.

49:13 the hospital. A lot of tests based on that. OK. Um

49:20 . So I'm not gonna, there's names for all these things.

49:23 not, I'm not gonna go into that, but you could have um

49:26 point is they have different arrangements singular one end. And rule of thumb

49:34 if a car is motile 999,000 times of 10,009 million times out of um

49:53 rarely. Let's put it that If you have a bacteria, that's

49:57 that it will be nothing other than rock. The bottom line is

50:02 Bacteria are typically one with a because , there's a couple but not very

50:07 of, of examples of coile moile in a small. Um All

50:16 And you could, it's not very , but you could use flag arrangement

50:22 a way to ID some, some these, but that's not commonly

50:26 It's actually very tricky thing to but nonetheless, um motion. So

50:32 talk about motion with these things. . So, um all right,

50:38 best way to look at this to us through this thing here. Um

50:45 . Not that let me just go and go here. OK. So

50:52 our bacterium swimming along. And so flagella you see there are kind of

51:00 rotating in unison. OK. So they're in unison like that is when

51:08 get a straight line motion, like see this thing moving a lot.

51:15 . So these are counterclockwise rotations, ? Let me pause for a

51:21 So this guy in the middle here having these counter clock rotations and they're

51:27 that brings all the uni to move line. OK? These ones you

51:33 out here like this guy, That's when they move clockwise. So

51:38 kind unraveled, right? And something this is kind of just spinning in

51:44 , not really going anywhere. So let's just move ahead here.

51:51 you kind of then it alternates between motion and you see this guy unwrapped

51:55 tumbling, right? So straight line and tumbling. So it alternates between

52:02 two. So when it's tumbling, not moving anywhere, it's kind of

52:06 spinning in place. OK? And any kind of movement like this is

52:12 we call taxes, right? Like , but you pronounce it taxes.

52:18 ? So moving to, to light , that's what we're talking about

52:24 We're talking about chemo taxes to right? So what's the thing?

52:29 are they gonna move to? What they gonna move to something that's a

52:31 they can eat, right? uh the movement is, is,

52:36 stimulated by that, right? So fur of the cell will have receptors

52:43 various chemicals. And if it's a chemical that will promote the movement to

52:49 counterclockwise to keep moving toward it. . As it keeps moving that way

52:56 impacts more. They keep telling you in a straight line on a clock

53:03 . Right. Um If there's kind nothing out there for it to eat

53:08 , or to buy to its self to move it then spins more

53:14 So this is all about frequencies. much is it, how moving

53:19 How much is it tumbling? So about the frequency of those two.

53:25 . So let's move ahead here. there is an attraction, right?

53:29 something it would, that would stimulate movement. OK. So it's going

53:34 and now, oh there it starts tumbling, but the frequency of

53:38 will be less as it continues to and be um bound with that attractive

53:46 . OK. Let me. So like receptors on the front.

53:51 So there it goes moving, let's it up a little bit. So

53:55 see kind of the movement it that's what we call um kind of

54:00 ran looks looks somewhat random, Kind of like a OK. But

54:06 is biased toward moving toward the right? So that's the net net

54:11 is moving toward the attractive but less . OK. So, um so

54:17 what's called a random walk, Leave these points here. Ok.

54:25 the idea here, think, think , think of it as a cell

54:29 trying to find something out there, they can buy into it and move

54:34 a nutrient, right? So by more often, it may, it

54:39 it off in different directions randomly, ? With the idea of being,

54:43 , ok, if one of these will be something I can use and

54:49 if it encounters it, then it to be less tumbling, more straight

54:55 . That's really what this is all . OK. So, and that's

55:00 you see here, alternated between these types of motions, tumbling and

55:07 OK. So it's all about the of those two and the presence of

55:13 is what will, will increase the of runs of clock counterclockwise motions.

55:21 . Uh So the left versus the . OK. Um Any questions about

55:28 ? OK. It's about, am gonna tumble or try to find

55:32 Well, if I do, then be less tumbling and more runs

55:36 toward the track. OK. So , no type of motion this to

55:44 bottom of the jar, but the is attached. So here you

55:50 it's called the Axio filament. So of it as a flagellum wrapped around

55:56 covering of itself wrapped around and then at both ends. OK. So

56:04 still, it's still a flagellum that like the one above, but it's

56:08 wrapped around the cell gives it a unique most cork scream. OK.

56:15 so um this is what we we see this Inspire Keys.

56:21 And those are the two main types spies both cause disease. Uh Cryan

56:26 um syphilis. OK. And uh fact, the itself is very

56:34 So, syphilis, one gets like sores as in initially when you get

56:39 syphilis and the sores themselves will contain organism. It's, it's very easy

56:44 identify as a microscope. Your body these type of bacteria, they have

56:50 cross shape. So if you've got , you can be pretty sure it's

56:54 syphilis. And so, but also cross motion is how it actually can

56:59 penetrated into your tissue. So I of course you bore in it pours

57:04 your tissues and, and it can penetrate your body and uh get deeper

57:09 your tissues. Ok. Um So kind of a different kind of motility

57:14 . OK. Um OK. and so these are um they're made

57:25 the same uh protons, right? proteins, I tend to be

57:33 more numerous. OK. Like you in this picture here, the

57:38 I tend to be more specialized OK. So really about uh

57:45 So you can see forms or the to the surface. The um uh

57:55 can be a factor. The I the 015 70 coon has trim those

58:01 Trib don't cause disease. Because it's it attaches to your intestinal wall.

58:07 Kline less numerous but 10.5 specialized Uh conjugation, we'll talk about that

58:15 . That's what you see here in picture. So sex pilots can transfer

58:19 DNA between cells. Um You can pill I that involved in transformation.

58:27 is the update of DNA from the . And so if you have a

58:31 that extends and grabs onto it and into itself, uh it can also

58:37 a mechanism of movement too. And so we see that here.

58:42 so here is a uh bacterium for pe uh specialize in movement.

58:51 This is what we call twitching OK. And again, it's all

58:55 . So the movement of this with for a cell kind of suspended in

59:02 aqueous me swimming around in there. . This is strictly movement on the

59:07 . OK. And so you can here on the surface here, the

59:12 extend is simply just taking units of protein and adding polymerizing, right?

59:19 it longer, right? Or taking off and making it short.

59:24 So the pylos extends, it attaches . E polymerizes or it takes units

59:31 and then it moves forward. So can see a net movement from where

59:34 started where it ends. So it's way for it to move along the

59:39 . So this is a kind of really kind of weird motion.

59:42 Think of, think of like a on dry light, right? Or

59:47 a p like that. So gives kind of a weird motion.

59:53 Um If you remember from lab, looked at um proteus, OK.

60:01 so they form colonies on the but then they'll, you'll see a

60:07 film of growth extent away from OK? And that's due to this

60:14 of swarming behavior, this twitching due mo and that's why the cells are

60:23 out of the colony and just swimming more nutrients. OK. So uh

60:28 again, it's all on the that's the common thing or all occurring

60:32 the surface. OK. Um Any about? Yeah. OK. So

60:40 say this, this is a We talk about all these already,

60:44 ? So um get your breath So talking about cell walls after

61:01 OK. So slime layer haploid vi . The one. No,

61:54 let's count down from 10. There we go. You see.

62:14 . Yes, it's a a is . OK. Yeah, we just

62:22 about the ailment can be involved in . Um OK. So Waltz.

62:34 . So probably say a big deal made about cell walls in the context

62:41 bacteria in particular. Um It provides so identifying the so type you do

62:52 , OK, you're new through a OK, which you do a lab

62:57 a couple weeks uh that you were lack of. So you gonna come

63:01 of there with pink hands and pink and blue hands. Um So

63:08 as a gram positive or a gram . So what? Well, uh

63:14 and 20 something years since was first , but it still used as a

63:19 as a maybe a first step in because you can, you can really

63:23 out a bunch of organ microbacteria uh doing work a little less. But

63:32 that, it has diagnostic value OK. So it all and here

63:38 give us an example of, of here. OK. Uh These and

63:45 more besides meningitis, um pneumonia, , throat, um and common denominator

63:54 of these three is what is the , right? Cerebrospinal fluid, lung

64:03 uh throat swap, right? depending where you get the sample

64:07 you find as you see there a negative dioxide pairs uh from CS F

64:14 pretty much diagnostic for meningitis. Of , you confirm that uh throat swab

64:21 a doctor's office, you get ram uh oxide chains, streptococcus. So

64:27 still has that still the right clinical . So, um now the nature

64:38 the cell wall itself, right? don't need to memorize chemical structure.

64:44 ? Uh But obviously you can't talk it, show it to you.

64:48 . So uh so the short, acronyms are used are mag and

64:54 So and acetic acid and acetal So these repeat repeat throughout the whole

65:01 of the OK. And so all is synthesized as a single molecule,

65:10 ? And they wrap around the OK. And so it's the see

65:16 we're having acid where connections are made the chain itself, right? They

65:23 cross bridges. OK. So uh is an example of that. So

65:30 have that's in the cross section, . But here are um the tubes

65:36 the peph like hand sugars repeating units connecting them are these peptide cross

65:44 So, peptides are amino acids uh four or five in length that connect

65:51 N ac acid units. OK. are supposed to. So, uh

65:57 like uh if you saw the road going on in Collin, uh even

66:05 you're in the summer, you would , you would have seen that when

66:08 dug it all out and new they put down these metal rebar right

66:14 pour concrete. So it kind of to reinforce the concrete. That's kind

66:18 what this is about, right? the the peptide cross bridges are kind

66:23 about reinforcing the base structure here. . And so these are gonna,

66:29 are gonna be, you know, the whole cell uncovering the whole

66:34 right? It could be, it of together held together are these cross

66:39 . OK. And so um of course, this cell wall

66:47 right? There's a number of, , of enzymes that catalyze different parts

66:52 the process here to bring it all . And since this is a process

66:57 need to bacteria, um of course for many antibiotics, right? There's

67:05 of antibiotics that end with that Pyin amoxicillin, penicillin, right? These

67:15 target different aspects of cell synthesis. ? And if you interfere with the

67:21 to cross bridge, that really damages cell because then underneath the psycho spasm

67:28 kind of spills out into it and licensed. Ok. Uh The

67:36 And so here it shows you kind how this wraps around such one continuous

67:42 . In fact, uh the SAS another term for that. And then

67:46 that this this type of light hand is not like you think of this

67:50 a brick wall, right? It's very porous, OK? Um The

67:56 membrane kind of set of plastic memory will restrict what comes in. So

68:00 so hall itself is kind of porous and flexible actually. OK. So

68:05 think of it as a rigid brick . OK. So here I put

68:09 picture in because you just see the side by side right here is gram

68:15 , gram negative. OK. And can see here's the equivalent parts

68:20 Here's this inner membrane, right? gram negative, they call it inner

68:26 because it has another layer out right? There's the outer membrane,

68:31 ? So you can see in terms the peer of G I can how

68:35 it is a gram negative and how I'm sorry, gram positive and how

68:41 ingram negative. OK. And so , as I mentioned, he I

68:45 like an Oreo cookie structure. There's cookie layers, outer membrane, inner

68:50 in the inner is the cell wall thinner. OK. Uh thick,

68:56 layer. OK. So um so grand positive cell wall, OK.

69:05 simple, we can compare it to granite, right? You have the

69:09 membrane and then start off of the couple of layers, several thick

69:16 cross bridging. And beyond that, have what are called the little black

69:21 here. OK. Those are OK. Um It's kind of a

69:29 sugar poller units. Uh but it the purpose of reinforcing cell wall.

69:36 . So wall of ones link, it to the uh link to

69:40 I can uh as you see OK. Uh Lipoic acids are kind

69:45 backwards. So these, these link to the membrane here. So that's

69:52 guys going this direction, OK? vertically and then the wall ones are

70:01 horizontally, right? So they all of mesh together and maintain the integrity

70:06 the cell wall. OK. Um that's the go again, don't worry

70:11 memorizing this. This is what these black strands of tyco acid, that's

70:15 it looks like. And so it have these phosphate are negatively charged that

70:21 does play a part somewhat in um certain ions out and things like that

70:30 binding certain ions. So man, worry, don't worry about that.

70:33 it's function is really just for reinforcing structure. OK. And so um

70:40 are negatives by contrast have other stuff it, right? So we have

70:46 inner membrane, we have the black , right? Uh But then we

70:51 another layer. OK. So you see uh here's the outer membrane,

70:59 . Inner membrane, outer membrane. so now we create a space in

71:05 these two membranes. That's where the wall is at. We call it

71:09 persic space that doesn't exist in a positives because there's there's not too large

71:15 just wrong um type of and then proteins these are would connect cell wall

71:26 the outer memory, right? Keeps in place, right? Um The

71:32 is what you what you need about grand negative. It's a liberal poly

71:37 . OK? Um It uh it produce an immune response, right?

71:44 contains mentioned earlier the oo right. it is reactive to um your immune

71:53 . Um And it's actually right the old place that road.

71:58 And so uh the and so the rams state itself is these differences that

72:07 this outer membrane material is very soluble ethanol. And that's one of the

72:12 of the branch thing. And so you add ethanol kind of dissolves all

72:17 membrane material and the dye you put in the beginning called crystal violet,

72:21 is purple, it leaks out when add ethanol. And so now you're

72:26 with a colorless cell. How do see it? Well, you add

72:31 dye called saffron and that's red and pinky. So you put that in

72:37 the end and it holds on to . Uh and then that's why gram

72:42 are pinkish colored and ram positives aren't by the ethanol. So they hold

72:47 to that purple color dye. And you have the contrast between the

72:52 OK. So um we'll review this . OK, folks. So

72:59 Have a good long weekend, You got a holiday on

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