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00:02 This is lecture three of Neuroscience. we're going to finish talking a little

00:08 about the history of neuroscience and the . But what you realized, I

00:14 in the last couple of lectures is journey, this journey of inquisitive minds

00:20 the ages, the millennia and trying understand the human anatomy and the human

00:27 . There are limitations such that we cannot see uh the human brain.

00:38 now we have this difficulty of having brain that's translucent. And so in

00:43 to reveal the precise anatomy of the , we have to use the

00:47 we highlighted two stains. OK. two stains were the Golgi stain and

00:54 Nile stain. And we talked about fact that Golgi stain is really good

00:58 reviewing precise anatomy and morphology of these as only a fraction of the neurons

01:05 up the stain in bulgy stain, of the neurons. And we are

01:10 to pick up the stain, but stain is going to expose the sous

01:14 these cells. So you don't get anatomy and morphology of the processes,

01:18 dendrites and Toons in that. Uh missile stain is really good for the

01:25 detect methods uh uh were invented essentially Doctor Kin and Brodman. And there

01:30 methods to essentially describe the precise anatomy structure of the cellular units of neurons

01:39 glia. Of course, in the , the stacking directions densities and so

01:45 . So with light microscope, we pretty good resolution. But if you

01:50 , we need electron microscope in order visualize synopsis. The reason why is

01:57 are only about 20 nanometers in And the light microscope resolves up to

02:03 micro meters which is 100 nanometers So it's not powerful enough to visualize

02:10 synopsis. OK. Now you have microscope can help you visualize the

02:18 Uh but we also don't need to the stage to visualize neurons. So

02:24 slide was an example where we can infrared microscopy, infrared imaging in order

02:30 visualize neurons especially on the surface of brain or the surface of the slices

02:34 are placed under the microscope. So no stain that is being used

02:39 And these techniques allow us to visualize and place microelectrode on these neurons so

02:45 we can record electrical activity from these cells. This technique is called electrophysiology

02:52 neurophysiology. So you don't need a there. Now, if you uh

02:57 electro microscopy, what you can do you can zoom in and you will

03:02 that there are these synapses. So the presynaptic side. The presynaptic side

03:08 the side that is responsible for release the neurotransmitters. And essentially the presynaptic

03:18 here are these external terminals that are with, filled with vesicles that have

03:24 in them. This is presynaptic. will release neurotransmitter and dendritic spines are

03:31 . They're going to be receiving that and responding to that signal on the

03:37 spines. So this is something that quite interesting that we discussed that's unique

03:43 neurons. And the sense that you see it even further today is that

03:48 have for the most part, the morphology as a lot of different cells

03:53 or similar to other cells in the . It actually has the same organ

03:58 in all types that other cells have we'll discuss, but it has these

04:03 . And so remember Ramonica Hall says dendrites is where information comes in where

04:09 gets received essentially. And what you is you have these optical dendrites,

04:15 called ical that they're called ICAL because typically referred to dendrites that are coming

04:24 the apex of the pyramid. So lot of times this is a petal

04:32 . This is one of the major neurons in the brain. It's the

04:37 excitatory neuron in the brain, it an apex. Therefore, these dendrites

04:44 referred to as optical and it also the base. So the pyramid has

04:50 base. This is the nucleus of neuron. This is the base and

04:55 dendrites are basal dendrites and it will an axon that comes out, an

05:03 will have its axonal terminal that will the neurotransmitter vesicles in here. And

05:11 also learn that these axons and neurons myelinated. So they're insulated for a

05:19 . Right. We'll talk about that . But the interesting thing are these

05:24 , these little protrusions that we call and because they're on dendrites, these

05:31 are referred to as dendritic spines. there are only about one micrometer in

05:38 . And during the early development and the adulthood too, you have a

05:44 number of spines that are formed in spines and those protrusions, they're

05:50 So they can become larger and they can become smaller in size,

05:55 and weaker, they can be So some of these spines will disappear

06:00 new spines can be formed. So is a plastic process and this is

06:06 lot of learning and memory in which is on a cellular level is

06:11 here and on a broader level, you think about learning and memories,

06:16 you're learning something and memorizing something, neurons have to do that so that

06:21 have a memory. And so these the places of contact. Most of

06:26 synapses will be formed along the dendritic and the dendritic spines and they're one

06:32 in diameter. So they're really small and they're really malleable and plastic

06:43 And what we have in modern experimental , I think I already uh talked

06:49 this is the ability to visualize single , single dendritic spines, which is

06:56 synapse, single cell connectivity of these into networks, activity morphology and activity

07:05 these neurons. And in a clinical , we're gonna use positron emission tomography

07:11 non invasive imaging technique to look at brain maps. So I already mentioned

07:16 that these hotspots we refer to as maps and they are spreading. If

07:21 spreading, they're also referred to as waves. And I mentioned that in

07:26 clinical setting, these are great noninvasive tools to measure activity in the

07:32 . We're not looking at morphology, looking at activity of the brain,

07:35 it's metabolic activity, so indirect neuronal through metabolism, through consumption of oxygen

07:44 glucose. Uh However, the limitation is the resolution. So ultimately,

07:51 want the clinical setting to be able see overall activity of the brain and

07:56 in and see individual neuronal circuits, and maybe even synopsis that could be

08:03 uh potentially causing some early pathology. it's a, it's a, it's

08:08 dream, but I think it's a that will turn into reality in this

08:13 , virtual reality and artificial reality. talked about the fact that a person's

08:20 maps, therefore, physiology of the . Therefore, this physiology of these

08:26 are reflective of what you are what you are thinking what you are

08:33 , right? These are the brain . So if you're looking at the

08:40 , it's the occipital lobe that lights , you're talking, speaking, it's

08:46 uh uh Broca area on the motor that light up. So these are

08:55 maps. These are your thoughts, are your feelings, these are your

09:00 , these are your mother commands that gonna come out of his brain.

09:04 it could be as simple as playing game and clicking a mouse and you

09:08 a certain image or certain map of brain activity and that map of the

09:13 activity, the locations, the activation different neural networks changes in the presence

09:20 virtual reality. And it's not an to say, oh, so does

09:25 mean it becomes smaller and more That's just an illustration to show that

09:29 is a significant difference in brain maps two dimensional spaces versus the virtual reality

09:38 reality uh applications. So this is of the brain. And there are

09:47 different levels of which we understand and neuroscience, molecular cellular systems, behavioral

09:54 , computational neuroscience and neuroscience careers. , a lot of these careers

10:02 for example, neuroscientists is a phd anatomist, PhD neurobiologist. You have

10:08 neurosurgeon neurological surgeon is an MD. think I mentioned the residency for neurosurgery

10:14 10 years after you get an Uh it's really rigorous neurologist is an

10:21 . It's a person that doesn't cut brain. So the surgeon is the

10:24 that cuts your brain. The neurologist the one that consults you diagnose you

10:28 treats a nervous disease of some Neuropathologist can be MD or phd.

10:35 there are many talented phd S that in the hospitals, running the uh

10:41 labs, uh uh forensics, pathology so on. Uh neuropharmacology. We

10:48 learn quite a bit about different We will learn about interactions of neurotransmitters

10:54 these receptors, but also how drugs medications interact with those different receptors.

11:01 medications, as well as some uh substances. Uh Psychiatrist is an MD

11:11 nurse electric neurodiagnostic technician. That's pretty , right? So there's a lot

11:17 different applications for Neuroscience. There's a big field of rehabilitation of ner ner

11:23 nervous rehabilitation nerve habilitation. But for example, when COVID came about

11:30 a lot of people lost a sense smell. Most of us were

11:34 And a few days later or a later, that sense of smell or

11:38 returned for some people and not a small fraction. It became a chronic

11:45 . Uh they have potentially lost certain of smells, although the smell sense

11:52 smell returned, but they cannot smell . And so there's in reaction to

11:58 , there's actually like kind of a all factory rehabilitation center. I think

12:03 is uh somewhere near woodlands. It developed for that how to retrain your

12:09 and your brain to be able to smells, again, different types of

12:18 . So it's all changing with the world is many different applications of

12:28 And I use this link because uh Doctor Kilar updates these different um applications

12:37 future careers that somebody with neuroscience can . And the final two slides,

12:43 one before the final slide is a of neurological disorders. So I want

12:47 to know this in order to answer questions, simple definitions on your liter

12:54 lung. We will talk to a extent about Alzheimer's disease and epilepsy.

13:00 example, multiple sclerosis, we will talk about spinal paralysis. We will

13:06 talk about schizophrenia in this course. from maybe I mentioned cerebral palsy,

13:12 will not talk about. So I want you to know all of these

13:18 neurological disorders. And throughout the you will know a lot more

13:22 for example, epilepsy or Alzheimer's But for now, I want you

13:27 know these definitions so you can orient . You're in neuroscience course. Somebody

13:31 you, oh, it's Parkinson's You should know what Parkinson's disease is

13:36 you should know it now and you know it way better at the end

13:39 this course. OK. We'll touch stroke when we talk about COVID-19

13:47 Um as it's one of the consequences infections by this virus in the brain

13:52 can lead to um thrombus formations in blood vessels and stroke, rupture of

13:57 blood vessels. Goal of neuroscience is learn how the nervous system functions,

14:03 not really just to know how it . If we want to apply our

14:09 , um we want to understand the and we want to correlate how one

14:16 with the activity in the brain, these maps that I was talking

14:19 Can we predict, for example, maps an individual may form? Can

14:23 predict their behavior? Um Computer assisted techniques are gonna be very valuable.

14:30 that's where A I comes into You know that about 25 to 30%

14:35 all of the pathological test results that into MD Anderson Cancer Center are

14:42 But they're different from what MD Anderson pathologist would tell for that same

14:49 They would maybe identify different diagnoses. a lot, that's 20 25%.

14:57 one in four. So if you a diagnosis for cancer, there's one

15:03 four chance that that pathology, just pathology diagnosis. I'm not talking about

15:09 the other tests that may follow So typically, if you have some

15:12 or something, it will get cut , we will take a sample of

15:18 , right. So, but this now you look at the sample of

15:24 tissue and there's a 25% chance that gonna tell a person the wrong diagnosis

15:32 ? Because there's a human element It doesn't matter that there is automation

15:37 there is staining for certain markers and . In the end, it is

15:42 person that is going to interpret that . The same as your brain scans

15:50 ray scans radiologists, right? You take an X ray and then they

15:53 , oh, radiologist has to look it and then send you the

15:57 So it's not the machine that spits the report and says you have a

16:01 bone, but it's the radiologist that the files in front of the computer

16:07 10:38 p.m. Tired, maybe and maybe tired, maybe at 6 a.m. any

16:16 , right? But there is a element there and the the human bias

16:20 how one looks at the picture and it in another person. Another algorithm

16:26 fact may interpret the same result And this is where artificial intelligence,

16:32 think in computer assisted uh methodologies and models can really be useful to

16:40 out that human bias and have uh precise, more spatially precise, uh

16:49 diagnostically precise suggestions because an individual is a library, they have read books

16:58 the library. But what A I do is they can read the whole

17:04 and that's the difference. And you know things a little differently if you

17:08 access and more experiences. And that's happens with life. People get more

17:12 , they've seen more things they can this is like this this is like

17:15 , this is small like that. non invasive methods and new treatments for

17:20 nervous system disorders. That's where where we want to understanding of the

17:25 is great. We're not, you , Elon Musk is looking to create

17:29 neuralink robot, a device that will somebody's thoughts that will hook into the

17:36 , right? When avatar, you when uh uh what is the name

17:42 the movie where they have the avatars around? Come on. It's at

17:52 tip of my tongue. Wow. . So I was so excited when

18:04 , well, you know, when went with their big chaos to the

18:07 of life and connected to that tree life because I thought like,

18:11 that's gonna be the story, you , collective consciousness, thought process and

18:18 , peace, love, you 20 minutes later as, you

18:23 the same old Hollywood formula, shoot up, you know. But so

18:31 sort of like where Elon Musk wants go. He wants to, you

18:35 , look into your brains and read thoughts and there's plenty of volunteers uh

18:41 want to work with him. I over 2000 that have signed up

18:46 for this experimental and plantation. all right, this concludes our introduction

18:56 neuroscience and where the future of it go. It's really, we don't

19:03 , but we hope it's going to uh a lot of people with neurological

19:07 in particular. Mhm. All And now we're moving into neurons and

19:25 and with neurons and glia, we about 10% of all the cells in

19:30 brain, the neurons, 90% are . So I say that neurons are

19:35 chips in the chocolate chip cookie and cookie is boring without chocolate chips,

19:42 ? Wants just the cookie without chocolate . You want something in it.

19:47 that's the neurons. But leah which the dough, you can't have a

19:52 without a dough, you can't have brain without bleeding. And that's how

19:58 it is not just in supportive functions also in the development of the brain

20:04 homeostasis of the brain and normal functioning the brain. In order to visualize

20:09 , we have to exercise the gain the brain is mainly the stain or

20:15 infrared microscopy. And these different stains allow you to visualize neurons differently.

20:21 all of the processes and the fraction them miss all of the neurons and

20:26 of their Somas and there's a slew other stains and we'll talk about some

20:31 them in tracers uh later today. we already heard about the reticular theory

20:38 the neuron doctrine. Remember that og not that go you said was a

20:43 of the reticular theory that the brain one continuous cytoplasm, one cum with

20:51 plasma membrane surrounding this whole clump. uh Santiago Ramon Cajal was a proponent

20:59 neuron doctrine that these neurons are discrete units. That the connections between these

21:06 are plastic. That there is a principle of polarization poles where information comes

21:15 the cells here in the dendrites gets in the SOMA and gets sent out

21:20 these dark processes, dark stain processes . The prototypical neuron has a lot

21:29 features of a regular cell or of course mitochondria via para is

21:36 rough on the plasma reticulum, polar . But it also has these unique

21:43 spons that we talked about. And also has an axon that has myelin

21:50 wro wrapped around it for insulation. axon hillock is where the action potential

22:00 going to be generated. So this where the action potential gets generated in

22:06 axon hill up and then then it regenerated in each node of run veer

22:12 it reaches the external terminal. And has the same amplitude at the external

22:19 as it started here at the axon segment. OK. Uh Doctor.

22:26 . So with more nodes of you said is there increased propagation of

22:31 signal? It's not necessarily more nodes increase the propagation. Uh The number

22:38 nodes will depend on the length of Axion. Some axons are short and

22:42 may just have a few nodes, will have longer axons. But you

22:47 learn when we study action potential is unique composition of the channels of the

22:51 of run beer that allow for this potential to get reproduced at each node

22:56 run beer. And, and the for this, uh what we call

23:04 propagation or regenerative propagation is to preserve amplitude of the action potential from the

23:12 Axon here, Axon Hill walk to very terminal end of its axon.

23:21 happen the same way genes they get transcribed um into rnarnas, get

23:33 OK. Uh And you have slicing top. So you have RN

23:40 it gets spliced into messenger RN And we're to a certain extent uh

23:46 variants of uh of one another slightly variations of what happens during the

23:54 But you can also have a pathological variant. So this process is not

23:59 tightly regulated, you can have a MRN A splice variant that is going

24:05 be translated into a faulty podium. example. Now we live in the

24:16 genomic era and in this post genomic , we know what genes, what

24:24 we have, what they code what their sequences are. And we

24:31 a lot of genetic methodology in neuroscience in modern day biology too, so

24:39 can manipulate the genes in the experimental , we can knock out genes.

24:46 to knock out mice as the gene been deleted or knocked out. So

24:51 pick one of the genes from, say 30,000 in the brain and you

24:56 I'm gonna target and knock out a and you erase that gene.

25:00 you want to see what the consequences . If you erase that gene,

25:04 would you do that? Well, you, for example, found

25:09 a person who has epilepsy and you that they have a genetic mutation and

25:16 particular gene is affected by a genetic . And that symptomology or the disease's

25:23 . And you want to understand the of this disease. You want to

25:27 how this this epilepsy come about from mutation. Therefore, you're going to

25:32 that mutation. So you're going to potentially with either lower species organs lower

25:38 rodents or rodents. And in now you will try to manipulate that

25:44 . One of the ways that you manipulate is what if I take that

25:47 out? Am I going to recreate this animal? The same condition that

25:53 just observed in human that has that , let's say the mutation causes seizures

25:59 epilepsy. And I have a a knockout mouse and this mouse is

26:04 also that has epilepsy. Then it's successful model, it replicates at least

26:09 of the symptomology. Now, we to make sure it replicates as much

26:15 the human condition as we can replicate on the knowledge that we have.

26:20 , that's epilepsy is a disease that study in greater detail, but there

26:28 many different causes of epilepsy. One them is genetic, but there are

26:32 causes of epilepsy that are environmental, traumatic brain injury, glioblastoma, cancerous

26:41 in the brain. And as gauge epilepsy following traumatic brain injury. So

26:49 not always a genetic component. But it is a genetic component, then

26:53 wanna go and manipulate the genes. epilepsy formed due to traumatic brain

26:59 what are you going to do with ? No, you answer my

27:11 Oh, you're not listening to I said I know you because you

27:14 the next question. So you have genetic mutation and it has epilepsy.

27:18 I'm gonna try to tinker with that in the animal. I have traumatic

27:24 injury and I developed epilepsy. What my model going to do?

27:31 Not just traumatic brain injury, you to replicate. So if the cause

27:38 the gene, you want to manipulate gene, if the cause is a

27:43 , you want to induce the same using the chem. If the cause

27:47 traumatic brain injury, we want to the same condition using trat brain.

27:52 that make sense? But then the didn't have any kind of energy.

27:56 started out don't know where he supposed be stressed or something. It's called

28:01 . So what is stress? What stress cause? Maybe inflammation mo maybe

28:06 expression of cortisol. Therefore, what your model going to be a stress

28:11 of inducing too much cortisol, stressing animal out? Seeing if you can

28:16 the condition, right. That will the model then. So yeah,

28:20 many different models. There's many different of diseases come come about them,

28:25 in epilepsy that it can be what call sporadic mutation. It can be

28:32 chemical exposure can be exposure to nerve could be traumatic brain injury. And

28:38 each case, you're gonna try to that as a model in order to

28:43 as close as possible to the human . What does it look like when

28:47 replicate a traumatic brain injury in a or something? Well, we're going

28:54 a tangent here a little bit. uh, what does it look

28:58 You know, it's a good So there are many different types of

29:03 brain injuries. A whiplash is a brain injury. So you, you

29:11 hit, your car gets hit really . You have a massive whiplash,

29:15 have a headache, you have neck , traumatic brain injury, you repeat

29:20 enough times you could end up dead . Ok. So, so what

29:28 be a replica of the whiplash? sort of a water water repercussion,

29:35 sort of a movement of a cage which a mouse is to replicate

29:41 Right? Ok. What about the brain injury where you had a piece

29:46 shrapnel that penetrated into your brain? not a whiplash. How are you

29:50 to model that? You're actually gonna a little computer controlled hammer and you're

29:56 , and you're gonna, and you're , essentially, it's called controlled cortical

30:02 in a controlled manner. You exactly the impact, the strength of

30:05 impact, the duration of that So, it's a model is,

30:11 that what's happened in humans? You , they just get clocked with a

30:15 , clock with a hammer in the , in the same position all is

30:19 . But that's the best that we do. So, good questions.

30:24 the inquisitive minds going now. genetic manipulation, we're gonna genetically mutate

30:31 , the the knock out the we can also knock in a gene

30:34 is native gene is replaced with a gene. So you're not eliminating the

30:39 , but now you have tinkered with gene, you have some different uh

30:45 gene that you replace with a, a normal gene transgene as genes are

30:50 in over express. So you can introduce an over expressive gene. And

30:57 lot of these are models for neurological , many of which we have,

31:02 will have genetic basis, but many diseases will not have a genetic

31:08 They will have traumatic uh chemical um basis, stress driven or whatnot.

31:22 let's say you have two brains, , one is the normal brain and

31:25 two is an epileptic brain. And are called the gene micro arrays.

31:31 we're really good, we can have , these are micro arrays or micro

31:37 . These plates will have these little of them and they can have as

31:41 walls as you order the microplate you can have 5000 walls, 10,000

31:47 , 30,000 watts. Each one of walls will have a spot of synthetic

31:52 DNA with gene specific sequence because we it post no era synthesize that and

32:00 put place it in each well. . So we have 30 different unique

32:05 DNA sequences that we placed within Well, each one of these sequences

32:12 for a different gene. So you'll 30,000 wells, you'll have 30,000 synthetic

32:19 sequences. OK? You place it this wall and it's sort of like

32:24 , a Velcro by using the knowledge a Velcro because Velcro has two pieces

32:28 have to stick together the hard piece the soft piece. So here's

32:33 the, the one side of the who is landing there? Your question

32:38 I want to know what genes have , what genes are different in expression

32:46 normal brain versus the epileptic one. you can take the brain matter homogenize

32:55 . You can apply it into 30,000 . Usually it's automated applications of homogenized

33:03 , right? This is the other of the Velcro. Now, genes

33:08 will have equivalent expression in both brains this is red vile and this is

33:13 green vial that will mix to the proportion. We'll get a yellow column

33:19 those genes, all of the wells will have yellow signal. And this

33:24 fluorescent markers typically that are placed on wall too. So all the ones

33:29 have yellow signal, the genes have changed. There's no difference between normal

33:33 genes and epileptic brain genes for those subset of hundreds of thousands of

33:40 Now, genes that will have red reduced expression in gray two genes that

33:46 have green signal here are reduced expression gray one. So now you can

33:55 what genes changed and it's not only . In fact, this technique is

33:59 little bit more sophisticated. You can also which genes have been upregulated and

34:03 genes have been down regulated a normal versus hyla brain. But what happens

34:09 you have this 30,000 wells? What the result you're expecting that only one

34:14 is going to change? No. the most likely scenario is that you're

34:19 see hundreds of genes that are different normal brain and epileptic brain, hundreds

34:25 them that are different, some that upregulated, some that are with a

34:31 expression. Mhm. Is this There's 500 genes that are different between

34:40 brains and normal brains. Well, is because it's not 30,000. So

34:45 already narrowed it down to 500. what are you gonna look for

34:50 Maybe out of those 500 you're gonna for the 10 that are most over

34:55 10 that are most under expressed in brands, right? And you

35:03 yeah, why, why are these important? Because there's the biggest change

35:08 . But then you're gonna do some things, right? You're gonna go

35:11 your mentor and say, I see genes have regulated, I'm interested in

35:15 top 10 and bottom 10 down And then your mentor like Cilia Golgi

35:21 , I only believe these two genes involved. Therefore, you're gonna spend

35:24 rest of your phd four years studying two genes, go lock yourself up

35:28 the lab, talk to me every of weeks or so. So

35:34 and that's it. You're stuck with two genes. So if you are

35:38 Santiago Ramon Cajal, maybe after you pick up the third gene that

35:45 do additional studies on because maybe what do is you, you know,

35:49 mentor, of course, has a of knowledge also has a better understanding

35:56 you do. But a lot of things are driven by grant funding and

36:02 are issued to fund certain things, everything. So if you get the

36:06 , it's not like you have freedom do absolutely everything in any animal

36:10 It's like, no, you have animal studies and these animal models,

36:13 have to get approvals. It's not it's very difficult to have approvals for

36:20 manipulations for pharmacological treatments and the higher the species, the more of the

36:28 tape, the more of the regulation have, the more of the ethics

36:31 have associated with those studies. But , you know, you're as a

36:36 person, gonna say, my mentor to study these two genes. He

36:39 got a grant to study these two . Um, but I'm, uh

36:45 very inquisitive individual. I'm gonna go the library, I'm gonna read about

36:49 10 genes and I'm gonna find out two others have just been shown like

36:55 year, the last two months, just emerged. These two genes are

37:00 important for our policy and run down my mentor and say, hey,

37:05 you seen these? He's like, is this? What journal does it

37:09 from? Is it really a good ? And then it will say,

37:14 , well, I didn't know it's human factor again. So your

37:17 it's what your mentor have read, hasn't read the literature for the last

37:21 months. And that's ok because it doing something else, multiple projects

37:26 but you can bring that up to . You can be an inquisitive

37:29 In other words, there's also comparisons the literature to help you identify those

37:35 genes to help you further your Once you have a good bird's eye

37:40 on the changes, massive changes and number of genes, you can now

37:48 in on something that is based on findings, previous literature or you

37:53 mentors uh Neil had a question. So for, for something like

38:00 if it has different causes that um could be like a high or you

38:08 pass down. But is it possible the 500 different between those two?

38:15 , that, of course, And uh don't get stuck in the

38:21 number. This is just a, is just an example. But

38:26 it's a great question. So two brains and especially if we know that

38:31 , it causes the very different one let's say the genetic uh mutation and

38:37 comparative potential. Another one is an to a chemical or something like

38:43 There will be differences between two of . And in fact, a lot

38:48 times epilepsy is also referred as So it's almost like a number of

38:55 diseases that fall under the same Typically with repeated seizures is one of

39:00 main symptoms for diagnosis. But it's like different types of diseases because

39:07 they cause the cause is a different . Somewhat similar. The expression of

39:13 seizure could be similar. But also are many different types of seizures that

39:19 also study. Yeah. All Moving on boons are made, uh

39:30 of them remain in the cytoplasm, that get processed through rough endoplasmic

39:35 they remain or become membrane associated And we'll study most of the membrane

39:41 proteins, receptor channels, transmembrane G protein to receptors are all membrane

39:47 for our course purposes. That's going be our major focus. This guy

39:53 familiar. Yeah, you did that . So the Golgi apparatus. So

40:03 you're staining things, as you're studying , you, you discover things and

40:08 you discover things, you can put name to it. So Golgi

40:12 goi stain, he wanted the whole to be gold like everything. Smooth

40:17 reticulum. So uh you have the on the plastic reticulum, you have

40:24 sorting to their final destinations and adjustments happens by Golgi apparatus. Now,

40:32 is very important. Mitochondria is the of energy in the body and the

40:38 produces adenosine triphosphate. A TP. uses dietary stored energy sources, protein

40:44 sugar fat. It becomes pubic acid . It generates a TP with oxy

40:52 , generates a TP and out gasses dioxide. They have this crep cycle

40:58 cellular respiration going on in mitochondria. this is really important for the brain

41:05 think about this, your brain is £3.5 and wait. And that doesn't

41:15 much between a person that weighs 100 £50 and £350. Uh There's not

41:23 be a double in the weight of brain. It's gonna be around

41:28 How much of that is your total body mass, let's say £200

41:37 How much of that is your 1.51 0.752% let's say of the total

41:45 mass is your brain, but it 20% of the total energy. So

41:54 , in the mathematical physics terms, say it's a system that has been

41:59 outside of its equilibrium. It's consuming more energy for the size that it

42:06 . But we need constantly renewed sources energy and a TP for neurons to

42:12 normally. So this £3.5 mass sucks of all of the dieters stored energy

42:19 that essentially get transformed into a And used by the brain phospholipid

42:28 We refer to phospholipid bilayer as a fluid mosaic model. And we refer

42:35 it as fluid mosaic model because these they form by having the polar hydrophilic

42:44 groups that face either the extracellular reus or the cytoplasm inside the cells.

42:51 the fatty acid chains right here, acid chains are hydrophobic. So the

42:57 acid chains will come in meet each forming this bilayer. Even that you

43:04 cholesterol, you have transmembrane proteins that channels that allow for the passage of

43:09 and small molecules. You have g coupled receptors that are proteins that are

43:15 to the membrane associated protein complexes that stimulate secondary messengers and turn on downstream

43:24 cascades. It's coated with carbohydrates. a very dynamic fluid is structure.

43:31 these elements move through the membrane and nervous system, they move fairly

43:37 they can move through the entire neuron the matter of milliseconds. Some of

43:41 proteins within the plasma membrane and the boundaries in the shape of the

43:48 And the membrane is supported by the cytoskeleton. Uh elements that we'll discuss

43:54 the following slide. Um If you on this and some of the other

44:01 that I have. How was this ? So you can watch it on

44:10 own. And I will have links this in my slides that will link

44:15 to either videos and sometimes they'll link to articles too. And um you

44:21 find it all there. The major subtypes of cyto skeletal elements that we

44:25 is tubulin molecules that form microtubules are largest elements, 20 nanometers in

44:33 Then we have neurofilament and then we microfilament which are the smallest cyto skeletal

44:40 and they're made up of the smallest molecules. So if you look there

44:45 a whole kind of a structure, a lattice like structure, almost a

44:52 like structure of larger molecules, microtubules intertwined with micro filaments and neuro

45:01 This is a cross section of an . So an axon has been cut

45:07 , remember, the axons are So we cut through the axon here

45:12 the middle on the outside, we're myelination. So these are the sheets

45:17 myelin that wrap around the axons and the axon, you're seeing these spaghetti

45:25 uh structures and those are microtubules. these are referred to as microtubule highways

45:32 it will be very prominent, especially the axons because the cell makes a

45:38 of things in the SOMA and it to transport things from the into the

45:43 aspects of the cell. And it needs to take things back from the

45:48 aspects of the cell, the distal back into the SOMA for reprocessing or

45:56 or re synthesis. So if we at this image in blue, you

46:03 acting molecules. And what happens is these cyto skeletal elements, they can

46:12 and form longer chains. They can up and depolymerize into shorter chains.

46:21 allows you to have all sorts of in different directions to support the structure

46:28 smaller uh chains that are more easily down and they can float into a

46:37 direction and join with another structure or the microtubules around the microtubules. So

46:45 have this going on and where Acton in blue. And you can see

46:50 the smallest elements, they are supporting outer boundaries and outer edges of the

46:55 membrane. So when I said that genetic spines are malleable, they change

47:01 shape. That means the cyto skeletal underneath the plasma membrane, they also

47:08 to rearrange and change their lattices, polymerization depolarization elements in order to change

47:19 overall shape of the plasma membrane. , these are not static elements.

47:26 they they're changing elements because the shape shape may be the same but the

47:32 boundaries of that cell shape will But what is shown here in yellow

47:38 tubulin. And you can see that of tubular and most of microtubules are

47:43 the selma. And then you see very clear tubular micro tullar highways going

47:50 the processes also. Yeah, I . Are you still strange or is

47:56 are you still sharing your screen Am I sharing it? Oh,

48:01 mean on the zoom? Oh, a good question. No, I'm

48:13 . Yeah, it's better if I . Ok. So the cyto skeletal

48:18 , everything that I talked about the two minutes is in its slides.

48:27 that's the advantage of being in Now you can see that some of

48:32 micro jugular highways that will have their proteins such as Ken and these motor

48:38 will transport, for example, vesicles the SOMA into the distal aspects.

48:45 going to be another motor protein divan will be moving in the opposite direction

48:50 into the SOMA. So these micro highways are very important for transportation because

48:59 happens if we take 45 entangle it I 10? It's a big

49:08 right? So what happens if there traffic on 290 it's gonna take you

49:15 hour to get home versus 20 Don't go through Galleria 610,

49:26 As always traffic, you can try 3 a.m. maybe still a little traffic

49:32 ami guarantee you it might be smooth . So all the rest of the

49:37 . So the point that I'm making that if something happens in these micro

49:43 highways, if there is a jam gene such as what happens in Alzheimer's

49:50 , you lose the axonal trans, you entangle these elements, you cannot

49:57 things properly. So it may still and I have gotten wrapped around,

50:02 can still go through that. But it may take you 20 times longer

50:07 get to your final destination. So are very important uh for the functionings

50:13 the cell axons that we already started are pretty interesting. The axon hillock

50:20 where the action potential forms and this the beginning of the axon, this

50:25 the proper axon proper and a lot times axon may have its terminal destination

50:30 distance farther away, but it may these collaterals closer to its SOMA and

50:38 synopsis closer before it reaches its own and axonal terminal, there are some

50:46 between axons and SOMA. Obviously, are differences in protein composition. So

50:53 are certain protein channels that are present dendrites and not present in selma,

50:58 that are present in selma and not in axons. So it's a unique

51:04 of these proteins, subcellular dendrites will a certain types of protein Somas,

51:11 axons, uh yet other ones, er, does not extend to an

51:18 . Ok. The cosmic reticulation external . And again, what you're seeing

51:27 is that at the axon terminal, is the site where synaptic transmission

51:33 What you have is these external terminals loaded with mitochondria because vesicular release,

51:42 , exocytosis is vesicular release, fusion uh neurotransmitter release, exocytosis, endocytosis

51:52 that, that vesicle back, recycling chemicals to transport us back, refilling

52:00 vesicles, getting those vesicles primed in active zone. So they can be

52:05 fused to release their content. This a lot of energy and renew all

52:10 that energy at the synoptic terminus. that's where you see a lot of

52:14 mitochondria. So at the Axion initial here and now this is really

52:22 But at the Axion initial segment, you generate this action potential here,

52:32 action potential travels all the way to axonal terminal, right. And this

52:40 potential which is electrical causes the release neurotransmitter which is chemical, this neurotransmitter

52:54 to postsynaptic receptors will again cause a in the membrane potential. It becomes

53:04 . So electrical action potential causes the of the chemical chemical binding of the

53:10 receptors will cause a depolarization a change the membrane potential. Ok.

53:20 synaptic transmission is very important. Normal transmission, endocytosis of the vesicles reabsorption

53:30 transport and reuptake of the neurotransmitter that been released back into the pre synoptic

53:35 is very important. And there are dysfunctions and neurological disorders that can result

53:42 abnormal synoptic transmission and it could be chemicals that are involved. So when

53:49 talk about Parkinson's disease, for we will mention dopamine. It's a

53:55 dopamine synaptic transmission. It's a certain in the brain. When we talk

54:02 um clinical depression or anxiety, we about another chemical that is serotonin and

54:12 . With serotonin synaptic transmission is going be impaired and the synaptic transmission is

54:19 just how much of a chemical you and how well you release it and

54:24 . It's also what is happening to po synoptic receptors targeted by these

54:31 As a part of the disease, could be impairment in both the release

54:36 and also the posy response machinery due the faulty receptors that are psyop and

54:44 can lead to neurological disorders. Different and different chemicals would be associated with

54:50 neurological disorders. Epilepsy is typical and imbalance of glutamate and Gaba. Although

54:57 chemicals are also implicated and involved and study all of them in this

55:02 So you'll understand exactly what we're talking in just a few lectures. So

55:08 axonal transport can be taken. Advantage axonal transport is really good if you

55:13 to, for example, know I'm here at this piece of the brain

55:18 this piece of the skin. Let's I'm looking at this piece of the

55:21 , I want to know what neurons commu communicating to to this area

55:27 So I can use a dye. is horseradish peroxidase. I can inject

55:34 guy into the tissue or ceramic peroxidase specifically get taken on by axons and

55:41 is called retrograde transport. So, transport is from the selma to the

55:46 . Retrograde transport is from the from the exon terminals back into the

55:52 . So because I injected this hr dye here, the neuron axons will

55:58 this dye over here and we will them to the selma. And now

56:03 know that these neurons are the ones are communicating to this network right

56:09 right. This is just a simple that's actually a lot more complex than

56:15 work that we will probably reveal with . So horse riding peroxidase is a

56:21 is a tracer viruses such as herpes and rabies virus are capable of the

56:30 transport, retrograde transport. So they appear, let's say in the periphery

56:37 the nerve and enter into the neurons the processes such as axons. There

56:46 some viruses. When we talk about system, we're gonna talk about her

56:51 virus that causes chickenpox. And then life can reemerge as shingles. That

56:59 is capable of moving both directions. capable of moving anterograde and then it's

57:06 of moving retrograde. So there are that will move both directions and we

57:14 take advantage of them not to infect to infect to trace in a controlled

57:20 . This is not a, you use a virus that you can tag

57:24 a visible marker, fluorescent marker and can trace where that virus travels through

57:30 tissue and that can reveal a lot the connectivity and the projections in these

57:37 . Yeah. How do the viruses travel? How do they travel?

57:42 infect the cells? But it's a question because they may have their own

57:47 mechanisms. Yeah. Yeah, it be that they hijack a transporter protein

57:57 in many cases, we don't even the precise mechanisms. Yeah, but

58:02 can start replicating and maybe spreading even without active transport. But it's a

58:07 question. I actually don't know a answer for that. All right.

58:14 . So we will finish by talking Alzheimer's disease and how it relates to

58:20 we're talking about cyto skeletal elements. let's talk about Alzheimer's disease. How

58:27 of you heard of Alzheimer's disease? many of you heard of Alzheimer's disease

58:33 N PR or television? I have they have some new, yeah,

58:41 . There's some new treatments and technologies out to help with Alzheimer's disease.

58:47 do you, what comes to mind you think of Alzheimer's disease,

58:52 which is means what symptoms of dementia forgetting? Ok. So you're thinking

59:02 memory loss, forgetting. Ok. good. So, what, what

59:05 that? That is a symptom. right. And, um, an

59:12 of Alzheimer's disease is typically in people are 55 or older. It's a

59:19 . It's not a normal process of because you have plenty of people in

59:24 nineties that don't have Alzheimer's disease and 100 years old. And you have

59:29 in fifties that have Alzheimer's disease, progression. What is the disease

59:38 We already mentioned, symptoms, symptoms something that you observe. So,

59:44 you come into neurologist's office and you your older parent or grandparent, you

59:51 something is wrong, they're not not remembering some things. So they

59:56 test you for loss of memory. at first, it's a short term

60:03 that people lose. So at early , when you first get the

60:09 you may have lapses of short term . So you will interact with somebody

60:14 you will come back two hours later say like, did we just talk

60:17 this? I can't remember anything. can't remember what we talked about.

60:21 know, you really can, uh then it becomes progression of the

60:27 it becomes progressively worse. So if disease is not being controlled and Alzheimer's

60:32 , you can only slow down the of the disease with existing with the

60:37 medications, you cannot cure Alzheimer's. what is this progression? The progression

60:44 that things get worse from short term loss. At first, you don't

60:49 short term things, but you still your children's names, your major events

60:55 street names and then it starts affecting long term memory. And at some

61:00 , people with Alzheimer's disease, they remember anybody that is talking to

61:05 Sometimes they don't even recognize that It would be very sad for,

61:10 , for the, for the clothes loved ones to experience that loss of

61:15 essentially. But there's other things, anxiety, there's disorientation because how,

61:22 , how panicky do you get if like, don't remember something, you

61:25 find something. You know, you to go on the trip someplace I

61:28 can't find, oh my God. know, I'm gonna have to turn

61:31 my whole closet and see if I find that thing. And it's,

61:34 , it stresses you out. You're . Now, imagine this every day

61:38 everything you're doing. You can't find . You don't remember what it

61:43 You don't understand this. Is this I use for painting or is this

61:48 I eat? There is disorientation, spatial disorientation this time, disorientation.

61:56 grandmother that had Alzheimer's disease, one my grandmother's had Alzheimer's disease. She

62:02 walk out at 11 a.m. because in countries, she lived in Lithuania in

62:11 and the summertime 10 a.m. 10 PM sometimes 10:30 p.m. is live outside.

62:19 summers are very long and the days very long. So she would walk

62:22 around 10:30 p.m. go to a market farmers market to shop and then she

62:31 see no people on the streets and would say what's going on, where

62:35 everybody and you know, her neighbor she would call us and would

62:40 well, everybody is probably asleep, it's a dis disorientation of time,

62:46 of space uh where you're going. It's a terminal disease with no

62:53 It can also have comorbidities that forms is another disease that forms as a

63:00 of Alzheimer's disease. So some processes happens the pathological processes during Alzheimer's

63:08 it's almost like recruits another disease and called comorbidity. So people with Alzheimer's

63:15 have a very high likelihood of having . It's called comorbidity because now you

63:22 two things killing you co morbid. Alzheimer's is killing you causing neurodegeneration and

63:32 could be killing you co together with disease. So this is a lot

63:39 clinical stuff, symptomology, things like . We're not gonna get into treatment

63:45 . We're gonna get into treatment when study acetylcholine system. But these are

63:49 major cellular and network pathological hallmarks of disease. And this is how it

63:56 to what we just talked about is have the formation of these beta amyloid

64:01 that are extracellular and as they start , they actually physically start secreting things

64:08 are bad for neurons impinging on their and eventually causing the axons to degenerate

64:16 not being able to communicate to each . So, these are extracellular

64:20 it's almost like calcified plaques, be plaques. A lot of times we'll

64:25 senile plaques or dementia plaques. That's the beta amyloid plaques are. And

64:30 on the outside, on the you have information of neurofibrillary tangles where

64:37 have over expression of the TAU which basically accumulates on the microtubules and

64:45 the SOMA and causes those tangles. go back to this slide and think

64:51 what happens if I tangle my cyto elements with neurofibril and stuff like

64:58 I get that 45 wrapped around I cannot deliver goods. There's traffic

65:03 , there's very poor transportation. The is being killed from inside.

65:09 with neurofibrillary tangles and if you have plaques, the cells are being killed

65:16 outside with the plaques. So the amyloid uh forms extracellular top protein entangles

65:24 intracellular at the advance stages of Alzheimer's . You have a severe neurodegeneration of

65:31 brain. And this is a illustration a healthy brain next to the hemisphere

65:38 from Alzheimer's brain patients. So you a lot of neurodegeneration, shrinkage of

65:44 brain loss of particular gray matter. a lot of gray matter is lost

65:50 some white matter. A lot of matter that is still left.

65:53 this is gross pathological level. cellular level two major things that are

66:03 inside the cell tangles outside the cell envelope plaques with growths. You have

66:10 changes. You have shrinkage of the loss of gray matter and the more

66:16 the plaques, the more of the , the more of the progression of

66:19 disease you have, the more of symptoms, you are collecting, those

66:25 are worsening and you're potentially forming or a comorbidity on top of that

66:33 what happens is, it's not just remembering things, it's about your brain

66:39 being able to sustain the vital functions your body. An individual loses the

66:44 of scent, smell, sometimes taste and your brain cannot no longer

66:52 things like swallowing or even breathing. that's what the terminal end of Alzheimer's

67:00 , is your brain function completely collapses the at last stages of Alzheimer's.

67:05 I'm gonna end here today if you mind, hold your question until next

67:10 or you can ask me afterwards. , have a great weekend. I'll

67:14 everyone here on Tuesday and I'll have lectures ready then. Thank you guys

67:19 paying attention,

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