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00:03 | Yeah. Ok. Hey folks. welcome. Let me get this thing |
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00:26 | . Testing. Ok. Uh Let's . All right. So um today |
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00:36 | gonna finish uh 14 which ends Unit . OK. So um back from |
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00:44 | next week, um we'll start the unit. Of course, none of |
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00:50 | is on uh exam two. Of , it's on the next exam three |
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00:54 | is in April of mid April. Anyway, so uh we come back |
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01:00 | we've got uh at the end of week of that we uh too. |
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01:07 | . So, uh remember that the right? That's gonna cover six and |
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01:13 | and 14 that we've been covering and go through tomorrow, but you'll have |
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01:18 | until 20. So you basically have days to complete that and uh then |
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01:27 | workers do the, the same, same Monday. So uh lots of |
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01:32 | between now and then. Ok. So what we gonna do is we |
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01:41 | basically three things to cover in photography um I wanna uh then end kind |
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01:48 | with uh just based on some uh , some people come by and they've |
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01:53 | about this about the reduction potential So understandably I get that. That's |
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02:00 | you look at that and go, , I still don't get it. |
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02:02 | fine. So I wanted to spend little bit of time on that, |
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02:06 | , of, um, other questions away. So, but, |
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02:12 | I think it's important thing to understand terms of the concept of it. |
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02:17 | we'll spend a few minutes on it we have a question. I kind |
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02:21 | frame it around that. OK. , but let's uh first start with |
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02:27 | what we usually do, which is recap. OK. So, um |
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02:35 | . So again, in context so we started this metabolism section with |
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02:42 | metabolism, right? Chapter 13. how hetero eat basically, right? |
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02:49 | And what and how, how uh gets energy from that, right? |
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02:53 | mean fermentation uh you can, you start with glycolysis, right? |
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02:57 | then then you can either go through or respiration, right? Which is |
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03:02 | the stages of pyro that you look and um cycle. Then we we're |
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03:10 | up energy molecules along the way, ? And the h primarily uh fa |
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03:16 | two in the crab cycle, um couple a couple of spots to pick |
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03:21 | A T P S now by that level phosphor, right? And |
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03:26 | but then we're gonna take these, these electron carriers, of course, |
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03:30 | to electron transport chain, right. we're oxidizing the source, right? |
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03:37 | that source is providing the electrons for red reduced carriers, right, the |
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03:42 | A DH, right? And they up going to the um electron transport |
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03:49 | and then that would kind of delve that in, in the respiration section |
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03:53 | time and time before uh the components this up, right. And uh |
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03:59 | energy from that um uh it's a negative delta G process and the energy |
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04:05 | used upon protons, right? And that stored energy is then used uh |
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04:12 | make a T P S right energy as they go down the gradient, |
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04:16 | talked about this, right. uh but in restoration, so we |
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04:20 | at a restoration last time, So that of course, depends on |
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04:24 | going on there, right? It's other than that, right? And |
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04:29 | uh we looked at uh Lio Hydrogen Trophy method. So these are |
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04:36 | of related, of course. And um Hydrogen Trophy is kind of that |
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04:44 | metabolic energy producer, right? The two oxidize that uh protons and |
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04:51 | And so that's used among not just but he like E Cola can do |
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04:57 | . Um And then uh of li relate to what is the nature |
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05:02 | the sources inorganic, right? Um genesis is a property only of a |
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05:10 | of Archaea. OK, making methane CO2 and uh hydrogen right there. |
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05:18 | so um then as similar to dissimulator . And so I should mention |
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05:23 | you know, in the context of restoration, right? With the n |
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05:28 | and sulfur compounds right here. But they have diff can have different |
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05:34 | , right? Depends on the oxidation of the molecule, right. It's |
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05:40 | oxidized, that tends to be the that becomes an acceptor and is |
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05:45 | right? So they have different roles that role is kind of defined right |
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05:51 | . OK. So you can have molecules that serve better as a terminal |
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05:57 | , right? For anaerobic respiration, can serve as a source for Liro |
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06:03 | . So you can be either here here depending on the nature of your |
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06:09 | oxidized you are. OK. And similarly with sulfur compounds, right? |
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06:16 | those can be used for restoration that more oxidized, these forms and more |
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06:22 | forms service energy sources. So where fit, right? Depends on kind |
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06:26 | their what they're best suited for. . Chemically. And then finally, |
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06:33 | assim toy disc simulator processes, So remember that assimilation is once something's |
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06:39 | , does the cell hang on to or does it become part of its |
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06:44 | part of its biomass? Right? it is, that's in a simulator |
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06:47 | or pathway, right? This simulator released. Uh But then it's it's |
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06:53 | to be used by others in the . OK. So I hope that |
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06:57 | of recaps everything. Uh But we then talk about uh a little bit |
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07:03 | photography. OK. So uh now concepts, we talked about in |
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07:11 | the context of respiration, this right? It doesn't, it changes |
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07:18 | in kind of the components evolved in . But the idea and the process |
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07:23 | holds true in phototropic, OK. just that light is a driving force |
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07:28 | . OK. Obviously, hence photo . So, um so of |
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07:33 | I'll anyone that's a photo trope, all have some things in common. |
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07:39 | course, if you're absorbing light, gonna have molecules that are made to |
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07:43 | that, right? So they're gonna chlorophyll based, non chloral based, |
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07:48 | you're gonna have some kind of light molecules, right? And these are |
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07:51 | be and the membrane is gonna be part of it as well because you're |
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07:55 | stuff the membrane full of the Um The membrane also serve the purpose |
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07:59 | being able to create that gradient right? Because we're all gonna generate |
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08:03 | proton gradient as a result of this then um taking it and converting energy |
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08:10 | light energy into energy molecules, A T P and A B P |
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08:16 | . OK. Um So that's gonna common to uh photo but may not |
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08:24 | be common. Is this one right ? OK. The photos reaction. |
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08:29 | uh most all those of the four processes all just like this diagram |
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08:36 | They need a source. OK. source water served the purpose for |
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08:43 | algae santi bacteria. OK. Um molecules serve that purpose for other photos |
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08:52 | . But there is one process that started with that doesn't use this for |
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09:01 | kind of photo trophy. OK. , well, so we'll begin that |
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09:06 | a question to kind of cover OK. So which is true? |
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09:10 | this is the bacteria or adoption based . That's the, that's the unique |
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09:16 | if you will. OK. It involve any kind of chlorophyll molecules. |
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09:20 | me move this here, open OK. So which one of these |
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09:26 | true with respect to that? All , let's count down here. |
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10:39 | 21. OK. So um so remember you but your adoption based |
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10:49 | right? It's going to uh that's system that doesn't need uh an electron |
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10:54 | . It's a absorption of photons strictly it is and they have that unique |
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11:00 | protein and retinol combination, the retinol light and because it's covalent bound to |
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11:07 | protein, it, it absorbs light changes in terms of its configuration and |
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11:14 | change changes the protein configuration, which enables it to pump protons out. |
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11:20 | it's basically a light driven proton OK. And so um The uh |
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11:29 | statement here is this one. So they um are photo heros, |
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11:36 | ? They don't fix C O OK. So they absorb um green |
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11:41 | , they absorb green light and as result of pure purpleish color, |
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11:48 | Um And so that eliminates these two correct choices. OK? Um Doesn't |
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11:54 | ation of a donor again, just of photons of light is what |
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11:59 | what uh how the system works and doesn't use less chlorophyll, of |
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12:04 | uses lies Bater adoption. Ok. , she is the only one |
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12:08 | So, um so, but we'll about the rest of the time on |
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12:12 | chlorophyll based systems. OK. um and so in looking at |
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12:20 | of course, I'm assuming your what you're exposed to most is |
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12:27 | is the oxygen photosynthesis the way plants algae side bacteria photosynthesize. OK. |
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12:37 | you can really boil it down to types we're looking at today into if |
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12:42 | recall oxygen photosynthesis, right? Has photos, right? One is associated |
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12:49 | A T P production, one with A B P H production. |
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12:55 | So uh all plants algae santa bacteria photosynthesize do with that they have both |
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13:03 | . OK. The other types which only found in bacteria, not in |
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13:11 | , not in plan. Uh certain of bacteria can, can photosynthesize by |
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13:19 | only one of those two. They're not combined, they only have either |
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13:25 | one or two and that's it. that's basically the separation of the three |
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13:29 | . Is that OK? Then of , the, the fourth one is |
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13:33 | bacterial adoption group that we talk about . OK. Which is completely |
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13:37 | OK. So, so that's what look at that in a little bit |
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13:41 | detail as we go through, but in a nutshell. That's those are |
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13:44 | three differences in terms of the chlorophyll . OK. So, of |
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13:48 | uh the oxygen photosynthesis is what you um is in terms of amount of |
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13:57 | activity is probably likely the greatest, know, it uh utilizes a lot |
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14:01 | obviously co2 um planet on earth and atmosphere fixes. Uh And that's what |
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14:07 | of the energy is going to. , that uh the light reactions that |
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14:11 | called are going to fix CO2. ? Because they're auto um there are |
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14:18 | couple of exceptions. Uh We already one bacteria adoption based, they're photo |
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14:23 | , there's another group in here that's a photo Hetro in China. But |
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14:28 | . So with oxygen and photosynthesis, the um uh based on chloral, |
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14:35 | chlorophyll lighting pigments. And so remember this group really is the foundation for |
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14:43 | ecosystems for the terrestrial plants, aquatic , cyanobacteria, um algae. Um |
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14:54 | , they're the foundation, they'll be highest biomass, right? Producers, |
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14:59 | ? Then you'll have successive layers of uh consumers on, on top of |
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15:03 | . But unless they're mouth for the kind of shape, OK. |
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15:07 | uh of course, they're critical to on this planet. And so uh |
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15:13 | chlorophyll base uh being these things are membrane bound molecules, they're gonna have |
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15:19 | area that's a very nonpolar part of molecule mean to stick to a |
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15:25 | OK. The part here is what the light right, what they call |
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15:31 | chroma. OK. And so uh chromeos are not just um part of |
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15:40 | fields. I mean, uh if in lab, the stains you use |
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15:43 | saffron and crystal violet and these their chroma have chroma forces as |
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15:48 | that's why they have these really bright . Um And so the um the |
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15:57 | types, there's two, a couple types A and B, they differ |
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16:00 | slightly. Um but regardless the arrangement these components, so you've got a |
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16:07 | of proteins, chlorophyll molecules and you other pigment molecules like xanthophyll carotenoids and |
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16:18 | . And they kind of helped to broaden the wavelengths of light they can |
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16:24 | . OK. And so that's really it's all about is maximizing light |
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16:29 | OK. And that is all dependent on uh the types of pi of |
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16:34 | you have the orientation of those molecules to light. OK. And uh |
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16:42 | that's absorbed, it's not absorbed the way every time, right? Because |
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16:47 | molecules will be slightly different in orientation whatnot. So, you know, |
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16:51 | the ones that first pick up light be here or maybe here or what |
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16:55 | you. But once that happens, they uh those photons of light that |
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17:00 | is transferred among these what we call complexes. They're the ones receiving |
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17:06 | the photons of light. And then that the that energy is shuttled to |
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17:13 | the middle, which is a reaction here. OK. And as energy |
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17:20 | , is transferred from component to there's, there's it becomes less and |
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17:25 | energetic. But that that pair in middle, those chlorophylls in the |
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17:29 | OK are maximized for absorbing that light . And then using that to |
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17:36 | push pro electrons out. So essentially molecule, this is what we call |
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17:42 | in this entirety. That's a photo , right P S, they call |
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17:47 | P S one P S two, that's a photo system. OK. |
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17:50 | so the light energy is meant to out electron from the system. And |
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17:56 | it goes through, we'll see this , but it goes through a series |
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17:59 | um electron transfer proteins. OK. that's how this begins. OK. |
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18:05 | so the the photo systems in the losing electrons is becoming oxidized. |
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18:12 | And so then you have to, of that you need to replenish, |
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18:16 | ? Just like we have to replenish aspiration, you have to keep feeding |
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18:20 | , you have the same thing right? And so for oxygen |
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18:25 | it's water, right? H2O is donor of electrons to the system. |
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18:31 | . So uh now, in terms how this is structured in the |
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18:36 | OK. So you're obviously aware of cods, but your familiarity is likely |
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18:42 | the context of a chloroplast. So you kind of have to uh |
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18:47 | it out of your head because that bacteria don't have co OK. But |
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18:53 | do have membrane and that membrane can highly folded up, which is what |
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18:58 | seeing here. OK. And and, and it just really represents |
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19:03 | plans of membrane that's highly convoluted has little connections between parts of the membrane |
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19:10 | kind of keep it all all OK? But lots of surface |
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19:15 | right? That's stuff full of pigments to have barrier, right, to |
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19:18 | the, the proton radium. but they it's called the thyroid, |
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19:23 | ? That's it's stuffed with these pigment , OK? Have them too, |
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19:29 | ? But they're just contained within an within the cell. This is not |
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19:34 | here. This is a bacterial cell has this just really folded membrane structure |
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19:40 | of these pigments. OK? so looking at absorption of light, |
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19:46 | , that's what it's all about. so chlorophylls absorb in the red and |
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19:51 | range. And so I have peaks you see here. OK. Uh |
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19:56 | then you know, it's, it go a little bit beyond that because |
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19:59 | see there's kind of a a right? And that's due to the |
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20:03 | accessory pigments that are part of the along with chlorophyll, OK? And |
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20:08 | this is what your oxygen types will . OK. So red and absorbing |
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20:14 | and blue means you reflect green So hence they look green. So |
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20:19 | plants, santa, bacteria of are pretty much green and so bacterial |
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20:25 | have peaks outside this especially over So remember light wavelength, the energy |
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20:32 | it is proportional to the length So long wavelengths means less energy, |
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20:40 | wavelengths, more energy. OK. clearly what bacterial chlorophylls absorb is rather |
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20:47 | energy that's like infrared, far infrared OK. And um so the uh |
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20:57 | terms of hierarchy, if you have mixture of these which you do in |
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21:01 | say a aquatic environment, your oxygen , particularly at the top parts, |
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21:07 | tier um absorbing is more high energy . OK. Then this light as |
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21:14 | gets absorbed, then this light trickles this lower energy light and cashes down |
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21:22 | the lower layers are where the types that light are at. OK. |
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21:26 | kind of in the middle of the , right? And they can be |
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21:31 | the sediments, even certain types of this light, really low energy tend |
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21:35 | be kind of in the sediments or in the lower depths. OK. |
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21:40 | But you know that's, that's the they absorb and that's how they can |
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21:44 | their energy. OK. So when look at um uh the, you |
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21:51 | heard it called disease scheme uh but oxygen and photosynthesis. So starting with |
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21:57 | of the flow of electrons who are from water to the photos systemss to |
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22:03 | OK. And so again, they've the two systems together, right? |
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22:08 | all the photosynthesizes that do it this have the two photos systems together. |
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22:13 | and, and two comes first because was discovered first, but it's actually |
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22:20 | in the order. OK. So kind of why it doesn't like |
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22:23 | you know, descending order here. regardless, so we have light |
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22:27 | electrons knocks them out and then you like in respiration, right? A |
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22:32 | of cytochrome quinones or the things that up the respiration transport chain, same |
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22:39 | here. OK. Different molecules but functions. OK. So electron transfers |
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22:46 | to a negative delta. That's a to be a delta sign. Let |
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22:50 | try it again. OK. Uh uh delta G. OK. Not |
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22:58 | better. OK. So they built G proton motor force, right? |
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23:03 | so we pump protons out and then have an A T P A over |
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23:07 | . OK? And uh A T synthe and so the protons will come |
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23:12 | . This is the same thing we've before, right? In the process |
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23:17 | T P is made, OK? protons come back in the same exact |
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23:22 | , right? Osmosis, all that's same poll is gonna be a little |
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23:26 | different. All the A T P is not gonna be that much |
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23:29 | OK? But that result is making . OK? And that's, and |
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23:35 | is only part of photos systems OK? It's important to kind of |
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23:41 | that because when we talk about the types of tropes, they're only either |
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23:44 | have just one or the other. if they have PS two, then |
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23:47 | gonna have all that. OK. , so then of course, the |
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23:54 | uh from where they begin here to here Lost energy, right? |
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24:02 | but they, that's what feeds photos one. OK. Right here. |
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24:09 | . Let me erase some of this of the way. A little |
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24:12 | OK. So here is our um system uh here and so electrons are |
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24:23 | then feed that from photos systems two again, light abortion, they get |
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24:29 | again. And here's another uh chain electron carriers, but we're not forming |
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24:35 | gradient again, like they're just going N AD P which is reduced to |
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24:40 | AD P. OK. So um not a, there's not a similar |
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24:45 | T P proton pump mechanism associated with part and P S one but there |
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24:51 | the N AD P H production. this is was associated with P S |
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24:56 | . OK. So, um so , light driven oxidation, right? |
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25:03 | electron like that has become oxidized. we gotta, we gotta fuel |
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25:07 | we gotta keep adding electrons to And that's where water comes in. |
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25:11 | flus, water become oxidized, giving electrons and forming 02. Hence the |
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25:20 | oxygen. OK. So uh so so electron flow Or the energy I |
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25:27 | say that comes as a result of light dependent reactions right goes to in |
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25:35 | part to fix co2 that takes a of energy, right? Remember we're |
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25:40 | that to build things like C six 12 06. So that's a big |
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25:46 | . OK. So um that takes lot of energy to do that. |
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25:52 | . And that comes from what you from the light reactions. OK. |
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25:57 | that's oxygen photosynthesis, plants, algae bacteria. OK. Um So water |
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26:05 | oxidized. Uh Oxygen is simply just product of the oxidation. OK? |
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26:10 | is not being reduced or oxidized. just a product of the water |
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26:14 | OK? Um So uh now, we look at the other two |
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26:21 | OK. And again, here is flow. OK. Right here. |
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26:31 | in this fashion here. So here go. Um any questions about |
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26:39 | I guess you probably heard this a times already um in bio and before |
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26:44 | um but the next part is really bacteria that have bacterial photos that have |
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26:51 | P S two or P S And then, and the things that |
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26:53 | associated with it. The first Uh I did it this morning. |
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26:57 | , I forgot I had this picture here again, just showing you kind |
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27:02 | an actual membrane and the components. . You don't need to memorize things |
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27:07 | and uh cytochrome B F, don't about that. Uh But it's very |
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27:13 | to what you see in respiration, ? Cytochrome quino molecules transferring of electrons |
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27:20 | the photos reaction providing those electrons um hitting. Uh But then of |
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27:28 | formation of proton radiant right here is A T P ase here. So |
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27:33 | energy production that we saw in respiration similar. OK. Um And so |
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27:39 | the middle, there's A P here's the P S one. |
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27:43 | And again, associated with N AD H production. So, uh the |
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27:49 | energy uh that result of oxygen of course, N AD P A |
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27:57 | um uh OK. So let's look these other two. So the first |
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28:03 | is, so both of these processes up now are an oxygen oxy is |
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28:10 | produced, it's not produced because a to the system, when those are |
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28:16 | , they don't form oxygen. So that, that's what we call |
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28:19 | an oxygen. So they use something than water. OK. And the |
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28:24 | sulfur bacteria typically use hydrogen sulfide but can use things like hydrogen in some |
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28:32 | , iron kind of a species specific . Um but they absorb, you |
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28:38 | , relatively low wavelength. So 8 compared to what we just saw like |
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28:42 | the seven hundreds. OK. Um they use sources again, that is |
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28:48 | other than water. OK. Light , same concept here. Uh electron |
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28:54 | kicked out and then a series of carriers finally to make an A DH |
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29:00 | an AD P H, it kind varies sometimes. Um But uh if |
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29:06 | look at it on the right so this, it's not an |
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29:11 | OK. But it is a struct structure you find in these types. |
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29:16 | It doesn't have the lipid bilayer that organelle would have. OK. It |
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29:22 | have fossil lipids. OK. You're arranged in that bilayer form. It |
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29:26 | have proteins here. OK. Uh what it does have is packed full |
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29:31 | these bacterial chloro molecules. That's what green blobs are. OK. So |
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29:36 | a light absorbing factory basically. So absorbing light, OK. And |
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29:44 | uh electrons being kicked out. And um then resupplied by the |
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29:52 | which is example is H two S . So now being a type that |
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29:59 | the P S one system, it have the, the system linked to |
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30:05 | T P production, but obviously, can still make A T P S |
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30:09 | . It can create a proton So you see the products of the |
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30:15 | here. So here's protons here, ? So it can produce a proton |
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30:19 | by simply oxidizing the donor molecule And then it will have an A |
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30:24 | P A associated with it. And It, it will certainly produce ATP |
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30:29 | way. It's just not part of , of a PS two system. |
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30:33 | . Um the other thing here is they are auto trust, OK. |
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30:38 | do fix co2. uh the the last group we're gonna look at |
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30:43 | has the PS two system, their header tropes which I um And so |
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30:50 | really what, what, what this is. So the next one is |
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30:54 | one that has just photos systems but also is an oxygen. |
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31:01 | Um Now, this is a little unique in that. Um it's a |
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31:07 | low energy, OK, like far , which is really low and that |
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31:14 | a consequence to that. OK. what it means is it's such low |
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31:20 | absorbed it, it doesn't have enough really grab electrons from something else like |
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31:26 | photos reaction as everything we've seen uh the chlorophyll based group half. |
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31:32 | So what do they do? they absorb light, they do uh |
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31:38 | the electron out, right? But it recycles back. So it's a |
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31:44 | kind of process. OK. And , because it's such a low energy |
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31:50 | by this photo systems that not uh it's not a powerful enough oxidizing |
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31:56 | to grab electrons from something else. it just keeps recycling. OK. |
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32:00 | we call it cyclic photo correlation. . And so it does, you |
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32:07 | , because it's P S two, has the A T P A s |
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32:10 | the ability to form a T P . But it relies on being a |
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32:16 | to provide its carbon to uh produce like an A DH. OK. |
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32:24 | Again, really, because of the they absorb is so little energy but |
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32:28 | enough to be just A P S it still is a heterotrophic. So |
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32:31 | the operative term here. So whenever see header troph, regardless of what's |
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32:37 | front of it, right, in case, photo, It cannot fix |
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32:42 | , it's gonna do what he which we saw in, in previously |
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32:47 | metabolism. That's what it's gonna but it has its ability to, |
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32:51 | do this as well. So, know, somewhat a very kind of |
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32:55 | organism in a way. OK. And this is the type you find |
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33:00 | the, in the sediments, sediments aquatic areas, we land environments um |
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33:06 | kind of where they live because they is where you get the low energy |
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33:09 | absorption time. So if you're gonna of recap this all in one you |
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33:17 | , right? So we started with photosynthesis. OK. So the two |
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33:22 | systemss, right? Uh the A P production here um and ad |
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33:29 | So uh the flow of electrons. the whole, the whole thing, |
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33:35 | , plants algae kind of bacteria. we break it down with the two |
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33:40 | . We have um photo system, the green sulfur bacteria can do this |
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33:48 | ad P H formation associated with Uh They are autotrophs. OK. |
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33:54 | And it's anoxic because they're using uh other than um water, right? |
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34:04 | oxygen is not produced. OK. then the last one we just talked |
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34:10 | is the purple non sulfur bacteria. . And so they um will ATP |
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34:20 | for the system for system two um produce um energy. But again, |
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34:26 | heros. OK. So they do on complex organic molecules to oxidize. |
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34:32 | ? Um and so that's all three . Any questions about that? So |
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34:39 | in the super detail here, but kind of just know basically what's going |
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34:44 | , that's really what we're going for . OK. So let's look at |
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34:51 | put a pin in there, so speak the this question. OK. |
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34:58 | which is true. Let me pause concerning photo trophy among halo, a |
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35:08 | bacteria, green sulfur bacteria and non sulfur bacteria. These are four |
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35:14 | that we looked at in the, the photo. OK. And it's |
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35:39 | , I'll talk a little bit about readout potential and, and what that's |
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35:44 | about. OK. Or recap what about? Give you a couple of |
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35:50 | to think about it. OK? Gonna Start Timer. You're 28. |
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36:33 | , OK. Yeah. If you D that's correct. OK. So |
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36:41 | uh remember that's gonna be bacterial adoption . OK. Um Cy bacteria are |
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36:50 | be oxygen and oxygen proponent sulfur light via bacterial chlorophyll. Not with |
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36:57 | OK. So, yeah. D the only one. OK. So |
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37:03 | let's go here. So any Yeah. So let's uh so let's |
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37:14 | this uh next kind of recap, of re rediscuss it a little bit |
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37:22 | a question. Let's just start with question. Then we'll kind of explain |
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37:25 | around. I'll explain it around this . OK. So um which statement |
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37:32 | false among a DC regarding the redox shown? OK. Pass that and |
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38:01 | is the extent if you wanna call , if you wanna call us a |
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38:04 | , this is the extent of the you'll be asked to do. There |
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38:08 | be at least a couple of questions this on the test and you'll see |
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38:12 | , you'll see one on the um as well. That doesn't require a |
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38:18 | to do forward shit. All So let's look at, I'm gonna |
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38:47 | back to this. Let me go . It is true and I'll come |
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38:53 | and we'll look at some of these here. So the way to look |
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38:59 | this table and I get that, like what's going on with this |
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39:03 | OK? So it's best to think it. Well, the way to |
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39:08 | of it is don't even look at yet. All right. Take that |
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39:15 | . It's a table of rankings of electronic sector. OK? So it's |
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39:21 | focusing, focus on that. And so if you have a ranking |
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39:29 | anything right, there's gonna be some are good and some that are |
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39:33 | it's gonna be a uh worst the , right? And so the ranking |
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39:40 | is based on reduction potential, the ability of a molecule to um |
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39:47 | electrons, OK? Reduction potential. we measure that as a plus a |
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39:52 | reduction potential. So we're focused on right now, reduction potential, |
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39:57 | That's what establishes the rank OK. so we can kind of do this |
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40:06 | kind of this is the deviation between and minus, right? We everything |
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40:11 | is plus, everything above is OK. So um so that's one |
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40:18 | , the other thing is to remember this occurs in pairs of molecules, |
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40:25 | ? So you can have, for , we looked at this pair, |
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40:29 | ? Or this pair, right? it could be nitrate, nitrite, |
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40:36 | could be sulfate H two S Every it's all redox pairs. One |
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40:43 | is the form that becomes reduced. the acceptor. And that's what this |
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40:49 | is. It's a ranking of OK? I can make another |
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40:54 | That's a ranking of donors. And if I did that, I'd |
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40:59 | to take, I wanna make, wanna put the I, I put |
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41:03 | blue column with the red with the colum that right? And I wouldn't |
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41:08 | reduction potentials. I put donor I make up something OK? Good |
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41:15 | , right? I put my blue on the red ones that if I'm |
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41:17 | do that, I'm gonna have to the reaction, right? Because if |
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41:22 | going to look at this pair H H two, I'm only looking at |
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41:27 | here as the table does as as a ranking of how good is |
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41:31 | as a accept? OK? Because two is not an acceptor right. |
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41:39 | a molecule that's a donor. And so, um, so like |
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41:44 | things, if something, if if it's bad at something at one |
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41:48 | , maybe it's good at something else that's what this is as well, |
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41:52 | ? If you're a bad uh acceptor weak, right? They use the |
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41:55 | weak and strong. OK? You that in the question, right? |
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42:00 | strong equals something that is good right? Obviously. OK? And |
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42:07 | if you're weak, you're not very at being an accepter, right? |
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42:10 | how do we equate that we equate in terms of the reduction potential, |
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42:16 | ? So one really basic way to about this is electrons are negatively |
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42:22 | right? If you are a good , you have a really high plus |
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42:28 | , right? So think of it plus attracts negative, right? So |
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42:34 | high plus value you're gonna attract lots electrons, you're gonna be really good |
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42:38 | it. So hence oxygen is the OK? The highest reduction potential, |
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42:43 | positive value OK? If you're not good electronic sector, then negative doesn't |
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42:49 | negative, right? Go go apart each other. And that's what these |
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42:53 | are right up here. All negative . So they too have a best |
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42:58 | worst, right? In terms of being good at um uh accepting. |
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43:04 | um so that's kind of how to at this. OK? So if |
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43:12 | then look at the next part Is Delta G. OK. So |
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43:19 | the relationship between reduction potential and delta , OK, that if you |
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43:25 | if you're a bad accepter, This guy um that equates to a |
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43:31 | positive delta G. If you're a good one, good, except for |
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43:37 | oxygen, that's a really high native , right? So, so the |
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43:43 | of combining, so what you try do is have a really good |
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43:48 | right? And have a donor that's good. And a good donor would |
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43:51 | one that releases energy doesn't require energy go. OK. And so if |
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43:58 | going to evaluate the donor, then . And we have to look at |
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44:06 | and we have to reverse The So for example, we look at |
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44:14 | to H plus right plus two OK? And so that's the only |
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44:21 | we can evaluate it as a dope becoming oxidized, giving up electrons, |
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44:26 | ? That's how we do that. right. And so um not like |
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44:32 | . So um so that's how we this. OK? And so we |
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44:40 | to reverse the reaction and reverse the , right? So, and, |
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44:45 | , and reduction potential is not really value you put on a donor as |
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44:49 | donor. We're asking not how, the tendency to accept electrons? It's |
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44:53 | a tendency to give up electrons. . So we, so, you |
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44:59 | , focus on the delta G, ? Um And so the, the |
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45:03 | G will change, right? So we look at H two, |
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45:07 | That becomes a, not a plus a negative delta G, right? |
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45:13 | 81. OK. So that's kind how to look at this. |
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45:19 | Um Glucose as a donor, Glycolysis, respiration, right? That |
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45:26 | 1 86 minus 1 66 then be G. OK. Metabolism releases |
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45:32 | That's there you go. OK. um so that's kind of how to |
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45:38 | this. OK. Um So if go back to the question, |
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45:44 | Uh A is pretty straightforward, Because we're just reading it off the |
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45:48 | in this fashion, right? It energy, reduced, sulfate. Oh |
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45:53 | , we can see that positive Delta . OK. Sure. B higher |
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45:58 | sulfide would be considered a strong electron . Think of it as a good |
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46:05 | donor, right? What's gonna make good if it releases energy as it |
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46:09 | this? OK. So we have look at the reverse reaction, |
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46:13 | And so that then becomes a minus one. So, all right, |
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46:22 | we look at the reverse reaction, ? So it would be a |
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46:26 | considered a strong killer because of OK. So that's true. The |
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46:31 | trite is a stronger term acceptor than there. Again, we're just reading |
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46:35 | straight off the table, right? Delta G is much different. So |
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46:42 | would be better. OK. So how to look is it help, |
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46:48 | any questions about that? So that's of logic how and how to look |
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46:52 | it. OK. So um you , that's the, that's the logic |
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46:57 | , that's why um that's this is we back up here. Why Um |
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47:07 | to this picture here. Yeah, one that this ah get my pen |
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47:18 | here. OK. That's why this , that's why this specifically, |
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47:27 | This part right here. It all everything we've been talking about the proton |
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47:33 | , the component of electron transport the the the source that the term |
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47:38 | all links together, right? And logic of, of how we can |
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47:44 | this flow this way, which is we need, right? Or what |
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47:49 | needs because that represents uh negative delta . OK? That's needed to pump |
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47:57 | out, all right, that's Then um as they flow back down |
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48:02 | this energy, we use that to a T P S. Um So |
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48:05 | all connected, right? And so , so the choice of source and |
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48:10 | right comes down to energetics. Uh bacteria and they have a variety |
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48:16 | options, right? You play a of different options, for example, |
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48:20 | you put together well a what's available what what is available you try to |
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48:24 | together where it's most favorable, You mean you hopefully a negative delta |
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48:29 | which translates into a strong proton gradient equates to directory equates to how much |
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48:35 | T P S you get. So of course determines how fast you can |
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48:40 | is one factor certainly. But um , it just, it's all |
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48:45 | right? It's why you're sitting there , right? Because of all |
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48:48 | that's happened. OK? Especially in brain tissues. OK? Um So |
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48:55 | I said, hang on day it all boils down to electrons, |
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48:58 | ? In some form or fashion. . Maybe electrons are protons, let's |
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49:03 | , OK. So um I, I do want to um because we're |
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49:08 | about nothing. The last three weeks think, except metabolism. I just |
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49:15 | throw a question at you about something haven't talked about in a while. |
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49:20 | is to see what you remember is as the test is coming up in |
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49:24 | couple of weeks. Let's uh fast . Not this one. This |
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49:31 | viruses. Anybody remember viruses? It's a while. OK. Just uh |
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49:38 | see what you remember. OK. come down here A 210. |
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51:10 | Um Who answered, who was one the 25 that answered h fess |
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51:20 | Nobody. Anybody Give you $100. fess up. Wow. Hey, |
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51:27 | $100? Jeez. OK. Because right, you picked. OK. |
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51:34 | minus single strands aren't a genome It's a template to make a plus |
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51:40 | , right? The plus strand is is the template for translation, |
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51:44 | The minus genome is not that The triage M 13 does not form |
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51:50 | prophage it's in sits inside of a and makes viruses but it's not integrated |
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51:55 | the chromosome. OK. Um CRISPR not a bacteria. It's a, |
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52:00 | a resistance mechanism. Ok. But have temperate sage. No, they |
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52:07 | , they have like cycle and OK. Or any viruses. |
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52:13 | they're commonly uncoded at the cell membrane because they do their stuff outside the |
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52:19 | . Ok. Tropism is not, is describing host range, right? |
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52:28 | is ability to infect multiple cells in same host. OK. And a |
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52:35 | is, that's not true because retroviruses possess a pen. So none |
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52:42 | OK. So that's all I got folks. So we'll see you have |
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52:47 | good week. Uh Hopefully do something . OK? And we'll see you |
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52:54 | here in several days |
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