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00:06 | Mhm. And for now, hey , welcome. Uh welcome. |
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00:33 | Um Thanks for braving the rain. thought it would be much worse than |
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00:40 | . The weather would be much worse what's going on out there, but |
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00:42 | it's more coming. Um So, so remember the the clickers, so |
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00:50 | check canvas for your points? Um It's all gonna go away next |
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00:58 | , right? The only reason they're posted is to make to give you |
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01:02 | of mind that. Ok, I my app, I'm using it. |
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01:06 | working. I'm seeing my points. good. Right? So when we |
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01:11 | , uh when it starts for real , you know, you know, |
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01:13 | system is working and you have no . So if you do have a |
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01:19 | um functional point solutions app, And you've been answering questions if you're |
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01:27 | zeros or dashes or nothing. then there is something going on right |
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01:33 | . I can't fix it, but got to go to the quicker support |
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01:37 | . Ok. Uh It's likely some of registration issue was usually boils down |
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01:42 | , but so that's what this is . So making sure that, you |
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01:46 | , it's working, right? Um, ok, so the next |
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01:54 | , um, so Friday, so Friday we have the first of those |
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01:58 | . It's really like, it's not it's like maybe six or seven questions |
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02:01 | something. Um, the, but , you know, the clock starts |
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02:06 | you begin. So if you start at one, you got to 130 |
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02:10 | can't, you can't save and come and do it on Sunday. |
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02:14 | Um Smart work. The first of is due on Monday. Uh And |
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02:22 | , so this week today, I we'll be able to finish up all |
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02:24 | chapter one stuff um and start metabolism week. So heads up. Um |
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02:33 | you, OK, when you, you look through chapter 13 and |
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02:38 | maybe you've gone that far. Uh freak out because you're gonna see a |
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02:43 | of uh metabolic pathways and equations and and that and the other. |
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02:50 | Uh I'm not expecting you to memorize the steps of all these processes. |
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02:55 | ? I teach it more knowing, the stages of the process, but |
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02:59 | in what comes out kind of OK. If you look at the |
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03:02 | notes, you kind of maybe have that. So don't be afraid that |
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03:08 | my God, I have to memorize these pathways and all these enzymes, |
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03:13 | ? So I have a way as do it uh that hopefully makes it |
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03:19 | palatable for you. Uh But those you that have kind of a, |
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03:23 | know, everybody has kind of some backgrounds in here that maybe you've already |
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03:26 | organic chemistry. Right? Generally if do that, you kind of have |
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03:31 | kind of through these things. So kind of do a little better, |
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03:33 | you don't need to have that obviously. Ok. So anyway, |
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03:37 | we'll, we'll get through it. , hopefully not too much, |
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03:41 | stress. Ok. So, anything else, any other, any |
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03:49 | , let me just ask a random . Anybody ever had an MRI? |
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03:54 | long do you have to stay in thing? You remember the? |
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03:59 | How long do you have to stay three minutes? Wow. Ok. |
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04:03 | , I have to get MRI on knee tomorrow. So it's gonna be |
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04:06 | he said, you're gonna be there 45 minutes. So, was it |
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04:08 | at the 30 are you freaking out there a little bit or? |
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04:12 | I thought I can see it How close is that thing to your |
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04:15 | ? Pretty close? Oh, my . Ok. All right. |
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04:23 | you did? Ok. Ok. , that's good. All right. |
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04:25 | , ok, so, yeah, don't know this guy, I scheduled |
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04:28 | with my doc. The doctor who the knee said, oh, |
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04:32 | that guy likes to keep me here a long time. So, do |
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04:35 | play music? Yeah. Yeah. . Good. So we'll see how |
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04:38 | goes. Never had one of those . So um yeah, of |
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04:42 | I'm gonna be at the age where things can be more frequent for |
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04:46 | So anyway, ok, so we're start with a quicker question ends |
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04:51 | So really the routine when we start time is like, ok, |
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04:56 | here's a question about what we did time and a little bit of summary |
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05:01 | the stuff we did last time, we'll dive into uh the next newer |
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05:06 | . OK. So let's uh take look here. OK. So we |
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05:12 | , excuse me, we covered uh of these things last time. Uh |
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05:16 | see how we do here. Mhm. Mhm. Uh OK. |
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06:07 | me a few seconds there. So uh count down from seven. Um |
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06:21 | . Let's see here. Uh So . Yeah. So we went through |
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06:26 | kind of the definition of a right? The microbe is so we |
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06:28 | biofilms aren't, they're made up of of micros but, but, but |
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06:33 | biofilm itself is not a microbe. . Uh I ka is not a |
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06:39 | of eukaryote. It's a prokaryote. we have the IKEA and the |
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06:43 | prokaryotes. OK. Uh mitochondria that thought to be a product, it |
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06:48 | endosymbiont relationship, product of that, not between a virus and you carry |
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06:54 | between a pro car out specifically a . OK? Um And then uh |
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07:06 | Mora uh at one time, put algae, bacteria found together in this |
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07:12 | group. That is true. Uh That was what's his name? |
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07:18 | . Right. So the answer is microscopy. Uh And um uh Mora |
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07:25 | then what happened was bacteria only left Mora pro pro and algae to |
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07:32 | OK. Um Meic. So that's , doesn't involve culturing. OK. |
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07:40 | using baby is setting all the DNA a environmental sample and then using for |
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07:45 | DNA techniques to, to clone those and then using that to sequence and |
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07:52 | that way. So it's, it's using cultures, it is how we |
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07:55 | find things that are out there that not able to be cultured, which |
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07:58 | basically most things, most micros. . And then uh spontaneous generation is |
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08:04 | biogenesis. So, spontaneous generation is from non life. OK. So |
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08:12 | , we'll talk a little bit about at the end of today in the |
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08:14 | of um because obviously there was something happened four, almost 4 billion years |
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08:23 | , right? Because there was no then. Now there is life, |
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08:27 | ? So there was, we don't to that as spontaneous generation. That's |
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08:30 | kind of a term that's kind of kind of negative maybe but use more |
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08:36 | term. Um They actually used uh from an abiotic world to a bionic |
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08:43 | . And there's a lot of work that a lot of work has been |
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08:45 | in that area. Uh We haven't quite been able to do it yet |
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08:50 | life from not life but lots of kind of experience around that. |
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08:54 | so obviously, there had to be kind of event or than years ago |
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08:57 | led to that evolution. OK. any case, um let's uh so |
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09:04 | briefly. So we went through um of microbe, right? So remember |
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09:08 | . So I always say, you , in terms of studying this |
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09:11 | whatever you're studying this semester, for , what have you, it's to |
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09:15 | of test yourself and, and think questions in your head to, to |
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09:21 | that you kind of know this right? So a real basic question |
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09:25 | be OK? I went through the on Monday and I think I got |
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09:30 | pretty good grasp of it. You yourself, OK, if I had |
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09:33 | draw a proc periodic cell and describe , could I granted I'm I'm not |
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09:38 | this is super complicated, but it's way to check yourself. You go |
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09:41 | . Well, let me just draw circle. For example, if you're |
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09:43 | a rod shape, that's fine, , right? And keeping it real |
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09:47 | at this point because we haven't learned about it. But you know that |
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09:50 | going to be no, no right? There's gonna be um no |
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09:56 | basically. OK? We know it's to be in a size range of |
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10:01 | to 10 microns, right? So you can rattle those off, |
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10:03 | bam, bam, you know that lets you know. Yeah. |
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10:07 | I think I, I know obviously we're gonna build much more on |
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10:10 | as we go through the semester. ? So these little self checks |
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10:15 | I think a good thing to do , uh, you know, give |
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10:18 | confidence about that, you know, material. Ok. And so, |
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10:23 | , it becomes more important, certainly , um, as we get to |
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10:28 | , maybe more complicated stuff, I to keep constantly checking yourself. You |
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10:32 | know this might kind of fool myself then I'll give you a good test |
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10:37 | China. Um All right. So so microbial definition, I need a |
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10:44 | to see it. Uh They are microorganisms, they're sailor cells, although |
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10:49 | is an exception of viruses which are cells. Um but uh you |
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10:53 | cells can evolve change, they can in food, et cetera, they're |
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10:58 | part of a tissue, right? aren't microbes. Uh they're not multicellular |
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11:03 | that are super tiny, like they're biofilms, they're not a colony, |
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11:08 | ? Biofilms are colonies represent lots of , right? So just make sure |
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11:12 | keep these things in my, in size differences, right? 1 to |
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11:16 | micron Os above that eres below that , OK. Um The uh you |
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11:26 | , the basic differences between pro curs U kleos. Um the variations, |
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11:31 | ? So we talked about just mentioned um um kind of the gray areas |
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11:38 | you will maybe or, or some the anomalies, whatever word you want |
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11:41 | use, uh you can have supersized typically due to their metabolism that either |
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11:49 | fill up with water, perhaps in vacuum and get real big visible to |
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11:53 | naked eye or another substance that increases size. Either typically how these kind |
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12:00 | larger sizes occur. OK. So talk about biofilms, um colonies of |
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12:07 | animals, tissues, organs. And so uh taxonomy. So we |
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12:13 | at, OK. Here are the where they fit in, in, |
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12:16 | the various categories of life, And uh they have a history as |
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12:22 | . Remember, the history here is driven by advancements in the microscope, |
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12:27 | better and better, being able to better. Rol. OK. And |
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12:32 | um so initially everything animals and plants fit into, then pulled out into |
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12:39 | and then from there and the prokaryote divide mona containers, prokaryotes and uh |
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12:47 | and fungi and tearing the other, other microbes, the periodic microbes. |
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12:53 | . Uh The symbion theory, uh origin of uh etic cells by symbiotic |
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13:00 | with bacterial types, engulfing them. leading to the evolution of the |
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13:05 | other to the chloroplast. OK. course, both coming respectively from a |
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13:10 | of synthetic bacterium and one from atrophic . OK. And then uh uh |
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13:17 | domains, right? So that was using the DNA sequence for the 16 |
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13:23 | homos RN A, right? Common all life. OK. And using |
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13:29 | as a means of classifying organisms, ? So the domains are the three |
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13:33 | taxonomic groups most inclusive. So uh car a pro um archia and |
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13:41 | So the significance there for us is , is the discovery of two pro |
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13:47 | groups like the bacteria and the OK. Um Meta genomics. So |
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13:55 | know that um we can't culture stuff the lab. Uh Most of the |
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14:00 | that are out in the environment, can't culture. OK. So we |
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14:05 | know why because we don't know the feeding regimes if you will of all |
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14:12 | microbes, because of all the interactions have with everything around them, like |
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14:16 | microbes, um the the various nutrients and things are in the soil |
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14:22 | water, whatever they're using sediment. we may not figure out everything that |
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14:27 | require. So it can be very to grow a lot of these things |
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14:30 | the lab. OK. Which is there's only been maybe three or 4000 |
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14:36 | at least have in catalog. So, but we found these other |
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14:40 | through meta genomics. OK. So involves not having the culture rather |
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14:46 | using DNA DNA comparisons to do And then uh we kind of end |
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14:51 | with spontaneous generation. And so looking experiments to kind of refute, |
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14:58 | This idea that life can come from these uh crazy notions of uh dirt |
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15:05 | water coming together, rain and dirt give a price to frogs, |
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15:09 | Or you have this recipe to make mouse, right? So these are |
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15:12 | things that were disproven. Uh uh it took paste to do the um |
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15:21 | , to establish that microbes, microbes not occur through spontaneous generation. |
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15:29 | And so uh so the pasture, his thing was um establishing. So |
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15:37 | a chemist, of course, you do chemical reactions and at at reactants |
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15:41 | products thinking it was a completely that was completely abiotic, no biology |
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15:47 | right? No cells at all. his work in fermentation production of wine |
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15:52 | showed that growth of cells accompanied the of the end products, right? |
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15:59 | , sugars, right, well then on by the yeast in this |
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16:05 | And those yeast converted that to uh the absence of air, right? |
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16:10 | to um ethanol. OK. And as he took samples, looking under |
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16:16 | microscope, we saw more and more more and more ethanol being produced right |
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16:22 | , what you may not have known we know now is that with |
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16:25 | um the end products actually can inhibit because they're typically acidic. Um or |
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16:32 | uh these are organic organic acids, alcohol, small molecules and um those |
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16:39 | be inhibitory. OK. So you do have a ceiling at which they |
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16:43 | and then the end products kind of them. But I think I mentioned |
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16:46 | time about uh nowadays we have all of specialized strains we can engineer and |
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16:51 | have acid tolerant, more acid tolerant that can give you wine that could |
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16:56 | upwards of 18% alcohol. Right. . So it's not for you |
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17:01 | OK? Um And uh the, , you know the here we're talking |
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17:06 | maybe eight or 9% alcohol with the . OK. So uh in any |
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17:10 | , his contribution was OK? This what you do in the process. |
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17:15 | off kind of off tasting wine you on occasion is due to contamination, |
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17:22 | contamination. OK? Because uh you you can ferment ethanol, |
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17:28 | ethanol, but bacteria can ferment as found out all kinds of things and |
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17:33 | kinds of end products with sugars. ? Uh A variety of different um |
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17:39 | and alcohols. Uh He could um differentiate between specific bacterial species and the |
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17:48 | products they produced. All right. so uh so the the the big |
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17:53 | here was this conversion of organic material microbes by cells, right? |
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18:00 | it's biological. OK. And um uh germ theory, fermentation really just |
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18:08 | it's microbes that are carrying out these , right? Producing various end products |
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18:14 | seeing that there was a growth in numbers correlated to an increase in products |
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18:19 | formed and reactants going away. So um now, OK. Now |
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18:27 | get into uh the next part here , and it's not directly um it's |
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18:36 | directly attributable to pasture. His contribution this work was the idea of this |
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18:42 | conversion of by microbes to products, ? So before we dive into |
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18:50 | let's look at this question here. . So which statement is true? |
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18:57 | this is one of those um I these here and there uh during the |
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19:03 | called before and after. OK. we may not s uh we will |
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19:09 | have seen, let me uh increase again. We will not have s |
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19:13 | covered this yet. We're gonna cover now. But let's see. |
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19:17 | let's see how you do and then see the same question in a little |
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19:21 | and we'll see how we uh improve . OK. So I was reading |
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19:43 | any questions or anything so far, questions? Ok. All right. |
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19:59 | . We pause it there a little of reading to do and it is |
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20:06 | fine to uh collaborate on these You know, two heads are better |
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20:12 | one, right? Maybe three heads better than one, right? |
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20:16 | uh, absolutely do that. That's . Just don't talk about, you |
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20:20 | , the game coming up on Sunday something like that, right. Ravens |
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20:24 | the Chiefs. Ok. Give it science. Ok. Yeah. |
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20:38 | I'm gonna count down from 18. ? Ok. Check. All |
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21:01 | Uh Let me just like a snapshot quick. Hm. Shot. All |
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21:13 | . Let's uh, move on and , we'll revisit this and we're gonna |
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21:19 | each of these A through F as go through. OK. All |
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21:23 | Uh OK. So to finish up uh thing on spontaneous generation, |
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21:30 | So pasture. So remember that the for this was, of course, |
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21:35 | have inanimate nonliving material. Step step two was providing air, |
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21:41 | They call it the vital force. . Yeah, those two ingredients and |
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21:46 | gonna get life, OK? And pure he goes OK. Um I'll |
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21:52 | a growth vessel that can meet that . OK? Actually, it's so |
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21:59 | but ingenious. OK. So he uh maybe a medium, I don't |
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22:04 | he, I know he was a blower as well, but maybe he |
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22:07 | a friend to do this. But any case, the typical growth vessel |
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22:12 | see there, but it has this as this swan neck, OK. |
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22:17 | to the air. And so contaminants arise that would arise would you know |
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22:24 | float on air particles, uh dust uh pet dander, these kinds of |
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22:29 | . OK. And of course, can fall due to gravity, |
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22:34 | So if you have to open the , you know, the the particles |
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22:39 | just fall by gravity to the to little crook, the crook in the |
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22:43 | neck. OK? And as long you didn't disturb the liquid um or |
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22:50 | the top of the thing off to it to air, it was |
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22:54 | OK. So when you, when would either tip it, get liquid |
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22:58 | there or you could just even just the top of this off, then |
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23:04 | would be in there and they would OK. And I don't know if |
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23:08 | is true, but it's, it's that he's, there are still flasks |
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23:12 | this that he made like in the seventies or something that are still on |
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23:17 | , in his lab that they still free from contamination, right? |
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23:23 | Anyway, but um so in a way to say, OK, well |
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23:29 | to air and our, and we this bronze which we boiled, |
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23:33 | But it's in our, it's, not living stuff and we have air |
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23:37 | we're not getting any micro. So that kind of said, |
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23:41 | you got us, right? And , you know, this thing of |
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23:46 | , relates to, if you, know, this week you're doing a |
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23:50 | uh where you have the plates and exposing it to air and you put |
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23:53 | fingerprints on it and you maybe you on it, uh maybe you swab |
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23:57 | cell phone on it, right? do you see what that looks |
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24:00 | Right. Um And stuff's gonna grow , right? Because they're everywhere, |
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24:05 | ? It's why that you'll start learning week in a lab to do a |
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24:09 | technique, right? Because you want do your work. Um such that |
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24:13 | only working with the strain, you interested in studying and not getting other |
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24:19 | in there. Because, you it's there in the air, on |
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24:22 | , on the surface, on your , right? So you have to |
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24:25 | with it in a way to minimize . That's what the aseptic technique is |
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24:29 | about. Ok. And so this of pasture this, but the pasture |
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24:34 | was really kind of that, you , that they are everywhere and you |
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24:37 | find it's not arising from nothing. only comes from life, right? |
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24:43 | so it's only when microbes accidentally get the liquid that that's been boiled to |
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24:49 | everything that they, that you get wrong because those cells give rise to |
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24:52 | cells. OK? Now, having that um there is some things that |
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25:02 | be a little bit inconsistent, let's , OK, so Kindle was a |
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25:07 | who basically was reproducing his experiments that that pasture did and he and he |
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25:13 | he was able to do that. occasionally he saw this phenomenon where um |
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25:20 | was there would be growth uh fall and you had the swan neck swan |
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25:25 | there and and you would occasionally get occurring. OK? And that was |
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25:32 | to be due to these guys, ? We'll talk about endospore forming types |
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25:37 | chapter four, I think uh in next unit. But this is |
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25:44 | this is really why you have to an auto acclaim or to sterilize |
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25:48 | That's what we do in lab sterilized because of these guys, right. |
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25:52 | the endospore, all kinds of spores the natural world, right? There's |
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25:57 | spores, there's um uh cysts which a type of spore that protozoans can |
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26:05 | . Um There's uh and that's what are, are kind of dormant |
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26:08 | And so there's all types of these of these in the natural world. |
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26:13 | . But the endospore is super right? Because it's the most resistant |
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26:19 | of any of these things. They've they've um been able to |
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26:24 | So think of these as a right? And so if you plant |
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26:28 | seed and add water, it will into a plant, right? So |
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26:31 | under favorable conditions, the score, score here is the it was so |
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26:38 | little circles you see in the OK. So these are all in |
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26:42 | process of forming a spore here is you see free end those spores, |
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26:48 | ? Don't worry about this. Now come later but, but it says |
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26:52 | end those spores that are super resistant they've recovered those from, from from |
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26:57 | million year old fossils that have revived right, to germinate. So very |
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27:03 | and uh can remain viable for a time centuries, right? Um So |
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27:11 | resistant to chemicals to temperature. And uh so if you have that, |
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27:17 | apparently had these in some samples of broth and occasionally they would grow. |
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27:20 | the spores would be able to be to the boiling. Then it, |
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27:24 | it cools down favorable temperature and now can begin to grow. Right? |
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27:30 | , really, it's the at right? Where you boil it, |
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27:34 | at rest the germ, the spore germinates and produces goes into the cell |
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27:42 | . OK. Sport. So, . So that germination process, |
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27:48 | So in the boiling phase, the is present or resistant to heat, |
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27:53 | cools down and they go, oh is favorable. Now, I'll start |
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27:56 | germinate. OK. Now, this is they don't all, they don't |
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28:02 | germinate at once, right? it's, it's some of them |
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28:06 | OK? Others stay in the indo form, right? So the ones |
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28:11 | germinate will be killed by the subsequent , the ones staying in the indoor |
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28:15 | form aren't, but then you let rest, then you boil again. |
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28:21 | eventually, if you keep repeating that eventually get all of the end, |
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28:25 | forces will have germinated and then be by the boiling. That's why you |
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28:29 | to repeat it. Right. it would be easy if they all |
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28:33 | at one time, then boom, them done, right? But they |
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28:36 | all work on the same clock. why you have to keep repeating the |
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28:41 | . Oil cool. B of nowadays, you don't have to do |
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28:44 | at all because we have an auto , right? We have a, |
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28:47 | can create steam under pressure which produces high temperatures, right? And kind |
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28:51 | a, a moist heat that penetrates spore. So we can kill in |
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28:55 | spores in 15 minutes in an autoclave less. Ok. But back then |
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28:59 | didn't have that. So you had kind of do this process. |
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29:02 | Any question about that? Ok. Yeah, we'll talk more about in |
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29:07 | sport types in, in chapter But this is kind of, you |
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29:11 | , this is part of the process , you know, discovering microbes and |
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29:14 | types of what they can do. . And among your endos sport |
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29:20 | um there's only really two bacterial groups do this and one of them is |
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29:26 | it has a lot of uh disease types. Uh tetanus is one of |
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29:31 | types. That is that OK. All right. So back to this |
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29:37 | of of pastures uh germ the fermentation uh that microbes could transform organic materials |
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29:49 | end products, right? Sugars to , for example. OK. Now |
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29:56 | that idea and go OK, in context of human disease. OK. |
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30:03 | these bodies are organic material, So could it be possible that a |
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30:10 | might transform a human body into a state? OK. And so that |
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30:18 | of began studies into that, but , that doesn't mean that pasture during |
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30:25 | fermentation is how we figured out No. OK. But it's the |
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30:30 | of that concept of microbes transforming organic into other things, is kind of |
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30:36 | carry over here. OK. So was Coke that established the, that |
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30:42 | can cause certain diseases and how to that. Ok. So with Coke's |
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30:49 | , as we'll learn, um this still the model used by CDC, |
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30:57 | Center for Disease Control. Uh when an outbreak, they go to the |
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31:02 | , they try to do various epidemiological . Um uh talk to people in |
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31:07 | area who've been affected, how many been affected, where were they |
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31:10 | And all this kind of stuff goes it. Uh But one of the |
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31:13 | is to go, OK. What's cause of this outbreak? Ok. |
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31:18 | you have to have some kind of to follow. OK. And this |
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31:23 | still used, although we've obviously learned lot of things since the 18 sixties |
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31:28 | relation to infectious disease. OK. while he was correct in his |
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31:35 | we now have a lot of knowledge where pitfalls can occur where there may |
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31:41 | some changes that we have to do some of these postulates uh that because |
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31:46 | learned a lot more. OK. so talk a little bit about that |
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31:49 | a second. But for now, he kind of had it easy right |
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31:53 | of the gate. OK. Looking this disease anthrax, which at the |
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31:59 | was affecting a lot of cattle uh he lived out in the country, |
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32:02 | was a country doctor and you could the effects of this disease on |
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32:07 | And so he said, OK, me see what this is about. |
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32:10 | he took samples of the blood from affected animals. And he could see |
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32:14 | obviously that these what are called bacillus shaped organisms in chains, right? |
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32:22 | present in, in only in the of affected cattle, not in healthy |
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|
32:27 | . Very easy correlation. OK. is what's causing the disease. It's |
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|
32:31 | found in diseased animals, not in animals. OK? And so it |
|
|
32:35 | required having a microscope and a sampling blood. That's it. You didn't |
|
|
32:40 | to culture or anything or nothing, ? So it was kind of easy |
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32:43 | out of the gate to go. . Now, I can establish my |
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32:47 | um principles here and uh but then got a little bit harder uh when |
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32:53 | went to look at tuberculosis. So, so now we go from |
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32:57 | theory of fermentation to germ theory of where microbes are the cause of uh |
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33:03 | infectious disease state in the body causing symptoms of the disease are in the |
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|
33:10 | , right? Um And so, of course, it's also involved animal |
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33:16 | like rabbits, mice to test this, this this theory in |
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33:21 | So etiology refers to cause of OK. That organism microbe x causes |
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|
33:28 | . Why? OK. And um so tuberculosis. So it required this |
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|
33:35 | now where we get the stuff you're in lab next week, you |
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|
33:40 | same, same techniques have been around 100 100 plus years. OK. |
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|
33:46 | um again, if you want to tuberculosis organism, that's all you want |
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33:52 | have in there. If you don't other stuff to complicate your results, |
|
|
33:55 | ? So AIF technique was developed how do a Petri dish and, and |
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33:59 | plates and that kind of stuff was during this time. OK. And |
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34:05 | , uh so it required the tuberculosis . Uh uh uh uh one is |
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34:12 | with tuberculosis, it's not really in blood, right? So you couldn't |
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34:15 | at blood samples and make it as as it was with anthrax, |
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|
34:19 | So it's a respiratory illness, it's the lungs, right? And it's |
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34:22 | relatively small microbe, right? So your body has microbes in them, |
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|
34:28 | you have your microbiome. So it be kind of hard to just visually |
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34:32 | what's what and what's causing the OK. So that involved, |
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|
34:37 | Now, we gotta get a way culture these things. OK. And |
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|
34:42 | he would take samples um from affected , you know, when you have |
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34:46 | respiratory illness or coughing and you know uh what do you call sputum comes |
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|
34:51 | , right? So that's what you use as your sample and he would |
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|
34:55 | grow them on a plate. And so this involved big plate technique |
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|
35:01 | you'll learn next week. And um allows you to get a vis a |
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|
35:09 | and physical representation of those cells on plate, right? Because liquids not |
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|
35:16 | , right? Because they could grow in liquid. I've already seen |
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|
35:20 | But in a liquid, you can't you can't, you don't have a |
|
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35:25 | of tweezers to pull out the cells then look at them and manipulate. |
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|
35:28 | not possible. So you need to them on a plate, grow from |
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35:31 | plate, they grow in the right? Then you can take individual |
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|
35:36 | , OK? And you can right? So that plate initial |
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|
35:42 | they have 2345 different types on Colony types, different color, maybe |
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|
35:47 | forms. Uh There's if you were this week, you learned about growth |
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35:52 | a plate and the different um right? Elevated colony um margin, |
|
|
36:00 | ? These kind of terms that's how can distinguish different types, right? |
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|
36:04 | then you can go OK, I'm pick this one and transfer it to |
|
|
36:08 | new plate. I'm gonna pick that and transfer it and then you can |
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|
36:11 | pure cultures where it's only that one on the plate and that's what you |
|
|
36:15 | can work with um all stuff. be doing a lab. OK? |
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|
36:20 | liquid media has its use and its . Oops not yet has its use |
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|
36:26 | if you wanna get volumes of right? Because you can grow a |
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|
36:30 | 50 mils, 500 mils, 100,000 , right? So if you need |
|
|
36:36 | have, you wanna isolate DNA, wanna isolate protein or whatever the purpose |
|
|
36:42 | , you can grow it in large . You generally need lots of stuff |
|
|
36:47 | work with. OK? And that's liquid comes in. If you wanna |
|
|
36:49 | a growth, growth, steady growth it, liquids typically your, your |
|
|
36:54 | to OK. So each form has of its use. OK? Because |
|
|
36:59 | cannot get a pure culture unless a is somewhere involved in that. |
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|
37:07 | That's how you can get it on , on a plate, you can |
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37:10 | and transfer to a fresh plate and pure cultures and you can only do |
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|
37:13 | with plates. OK. Um All . So let's look at this question |
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37:19 | . Uh So this is about Coke's which among AD E is, is |
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37:28 | . OK. So remember you have four postulates? All right, but |
|
|
37:33 | learned a lot in the past 150 since this time. So we're gonna |
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|
37:40 | not everything we know now is consistent each of these, but one of |
|
|
37:43 | uh and um ignore F OK. meant to take that one out. |
|
|
37:50 | one of these is consistent. So OK. So one is as |
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|
38:02 | wrote it. OK. The other wasn't really aware of. OK, |
|
|
38:10 | me uh pause this here for a . I also found a badge, |
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38:24 | , a security officer, I put on Sheriff of Microbiology. OK. |
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|
38:39 | uh count down. OK. yeah, if you did answer uh |
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38:55 | OK, you are correct. So which is um one of the |
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|
39:01 | in the process that he established. . Um The um he was able |
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39:07 | culture the organism on the plate and it into a healthy animal, healthy |
|
|
39:13 | came down with disease. But ABC D are things he really wasn't aware |
|
|
39:18 | . OK. Um Let's go through the actual postulates are and then we'll |
|
|
39:24 | back to this. OK. So the, so for him, uh |
|
|
39:31 | having uh culturing it on a so there are actually two culturing steps |
|
|
39:37 | in science is a good thing if can reproduce, reproduce data. |
|
|
39:42 | So that's really one of the strong about this process, uh his |
|
|
39:46 | And so step one was OK. microbe is found only in uh diseased |
|
|
39:53 | , not in healthy animals. Step one, step two is in |
|
|
39:59 | diseased animals. You can isolate the microbe and grow it in pure |
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|
40:06 | right? That you, you could that every time. OK? Then |
|
|
40:11 | OK. I can take this microbe pure culture and inject it into a |
|
|
40:16 | animal, healthy animal comes down with same disease symptoms, same everything. |
|
|
40:21 | . Then which is what the good is two culturing steps and each time |
|
|
40:27 | get the same exact thing, That's pretty good evidence, right? |
|
|
40:31 | so the the um uh the healthy , you injected succumbs to the same |
|
|
40:37 | and you can then re isolate same microbe out of that animal. |
|
|
40:42 | . So we know there are certain that we've just learned. Right. |
|
|
40:48 | one of those certainly, uh, certainly knew, we knew this way |
|
|
40:52 | COVID. But, you know, of the things with COVID was asymptomatic |
|
|
40:56 | . I heard that all the time the news. Right. So people |
|
|
41:00 | definitely carry pathogens and not be sick them. In fact, a number |
|
|
41:05 | human diseases are due to healthy individuals those pathogens. They're the source for |
|
|
41:12 | outbreak. For example, like you got, you got vaccinated for |
|
|
41:16 | coming here when you have outbreaks of , say like in the norm or |
|
|
41:20 | is traced to a healthy individual who has it naturally in their throat and |
|
|
41:26 | cough or something that goes out and individuals could come down. Ok. |
|
|
41:32 | So a lot of, you men meningitis, measles, mumps, |
|
|
41:37 | of different human diseases are due to carriers. Ok. Um He |
|
|
41:42 | he was not aware of that. wasn't OK. One disease, one |
|
|
41:46 | . So we had this kind he thought there was a relationship between |
|
|
41:50 | infectious disease could only be due to particular pattern. That's it. |
|
|
41:56 | Not true. Ok. Um uh examples, we have an example of |
|
|
42:04 | , let me think of an example that one where a disease would be |
|
|
42:12 | the one disease would be caused by than one patient. Anything. |
|
|
42:18 | Yes. No. Guess that's too . Thanks. Think of a respiratory |
|
|
42:30 | . Pneumonia. There's one caused by of different things. Bacterial fungal |
|
|
42:36 | is pro protozoal causes of pneumonia, ? Um, the um, one |
|
|
42:45 | , one disease. Ok. The one is one disease. One |
|
|
42:49 | Not always. Right. Second one one pathogen. One disease. Not |
|
|
42:52 | right. You may think of one or one pathogen can cause multiple diseases |
|
|
42:59 | you had strep throat. Ok. organism can also cause flesh eating |
|
|
43:06 | It can cause scarlet fever. It cause um other kind of skin |
|
|
43:14 | Ok. So there are exceptions to too. It's not, it's not |
|
|
43:18 | things always one for one. The uh passengers may not be able |
|
|
43:23 | be cultured. Definitely true. So this, this does not |
|
|
43:28 | Ok. Ok. Syphilis. Uh the bacteria that causes syphilis has been |
|
|
43:35 | since the 19 1900 still can't culture in the lab. Ok. Uh |
|
|
43:42 | , it's very easily detected through um lot of these things are detected through |
|
|
43:47 | imm processes. Antibody engine detection. . Uh So just because we |
|
|
43:53 | culture doesn't mean we can't cure it ? Diagnosis and cure it. We |
|
|
43:57 | can't. Ok. Um The the other wild card here is |
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|
44:04 | If, if Coke started with a that was viral, forget about |
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|
44:09 | He wouldn't be able to figure anything , OK. You know anything about |
|
|
44:13 | back then, right? No way even culture them. They're so |
|
|
44:17 | OK. So he kind of, know, you're lucky in a lot |
|
|
44:20 | ways too. And what he was . So elect a suitable animal host |
|
|
44:24 | applies to certain bacterial types. Also , you may not, you may |
|
|
44:29 | , they may not, they may grow in that host. So sometimes |
|
|
44:33 | an issue as well. So, again, as I said, |
|
|
44:38 | the postulates that he established are still viable framework. We just know where |
|
|
44:46 | may not be totally consistent, And so we're aware of that. |
|
|
44:50 | . And it may be that it's cultural and we're OK, we |
|
|
44:55 | we can work with that, we figure it out still. OK. |
|
|
44:57 | just we just have more knowledge and can, you know where maybe the |
|
|
45:01 | may occur. OK. Any questions that? OK. All right. |
|
|
45:08 | , um all right. So if you're working on, OK, |
|
|
45:12 | establishing that certain microbes can cause certain diseases. And obviously, the next |
|
|
45:17 | is how do we get rid of ? How can we help people that |
|
|
45:22 | sick with these infectious organisms? And so now we go into fighting |
|
|
45:27 | , um drugs, uh et OK. And so uh vaccination was |
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|
45:34 | by accident, I'm assuming uh actually like back in the 16, |
|
|
45:39 | maybe late 15 hundreds, early 16 . Uh smallpox outbreaks were all over |
|
|
45:46 | place of the world, especially in . And I don't know what, |
|
|
45:51 | made the person think this. But had the idea to, because we |
|
|
45:56 | smallpox, you have all these little all over your body, called them |
|
|
46:00 | , right? And those bumps rash are full of active virus. |
|
|
46:06 | So somebody had the idea of cutting of those pustules then inoculating a healthy |
|
|
46:12 | with it. Why? What made think to do that? I don't |
|
|
46:15 | , maybe some random accident, who ? But that in many cases that |
|
|
46:20 | who was vaccinated, right was They never came down with disease. |
|
|
46:26 | then they go OK. I this is a thing we can |
|
|
46:29 | right? The problem is those pustules 100% live active virus, right? |
|
|
46:35 | not everybody that they got quote lived, right? They can pop |
|
|
46:40 | and die, right? So we to come up with the other ways |
|
|
46:43 | kind of vaccinate uh but make it . Ok? And that's where attenuation |
|
|
46:50 | in. Attenuation means to to limit to um to um inactivate, make |
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|
46:59 | , make it still that it can , body can respond to it, |
|
|
47:04 | it can't um kill the person, ? That it can't be active and |
|
|
47:09 | disease in the person, right? ultimately the goal you want. |
|
|
47:13 | That's what attenuation is all about. Now before then, uh Jenner kind |
|
|
47:19 | did it in a different way rather attenuation. Ok. Using a different |
|
|
47:27 | , similar to smallpox but not identical smallpox virus. The cowpox, |
|
|
47:33 | And cowpox is a benign disease in . Ok. And, um, |
|
|
47:38 | had the idea to go. let me try this. It turns |
|
|
47:42 | to work as well. Ok. vaccinated with cowpox virus didn't come down |
|
|
47:46 | smallpox or had much, much, lesser symptoms of disease. Ok. |
|
|
47:51 | wasn't fatal. Ok. Pasture of , has hand in everything and |
|
|
47:57 | in, in the vaccinate vaccines as . He, he came up with |
|
|
48:01 | rabies vaccines, one of them among . Ok. So, attenuation, |
|
|
48:05 | . So we're trying to limit uh activate through various mechanisms and heat temperature |
|
|
48:12 | , many different ways to do And so of course, the this |
|
|
48:17 | the mechanism at play here, I'm , you know, is the body's |
|
|
48:23 | response, right? And so we a pathogen is put into the body |
|
|
48:29 | the person acquires a pathogen and on bacterium or virus or, or zoen |
|
|
48:37 | fungus or whatever the pathogen is, be, it'll illicit a response, |
|
|
48:43 | ? So, antibodies responding to right? So, antigens are the |
|
|
48:49 | that are on uh the surface on periphery of the bacterium or the virus |
|
|
48:54 | whatever it is. Uh that because what the body can see, |
|
|
48:58 | Um Your immune system cells can only what's on the outside of the |
|
|
49:03 | And what's out there all different types protein molecules, uh a flagellum made |
|
|
49:08 | protein, uh a viral spike You heard those in the COVID |
|
|
49:13 | the virus COVID virus, right? those are things on the outside and |
|
|
49:16 | what your cell can respond to. one of the responses is to produce |
|
|
49:22 | . OK. We're doing all this at the end of the semester. |
|
|
49:27 | . But antibody and that's what you , it's obviously the basis of |
|
|
49:31 | OK. So you want to uh the bacteria virus, inactivate it in |
|
|
49:38 | way and but still retain the ability induce the immune response. OK. |
|
|
49:46 | that's, that's what you wanna Now, of course, there's all |
|
|
49:49 | of ways to do that. You deal with whole bacteria, whole |
|
|
49:56 | But nowadays, often it's genetic right? COVID virus, the COVID |
|
|
50:01 | is RN A, right? So RN A is expressed expresses the engine |
|
|
50:07 | then your body responds to the So it's much safer. You're not |
|
|
50:11 | a whole organism into somebody as a . You're just taking the parts that |
|
|
50:16 | the energy. OK. And so different ways to do that as |
|
|
50:20 | OK. Um So the question why was cowpox magazine effective? Even |
|
|
50:27 | it did not contain smallpox, I mentioned, right? Very similar, |
|
|
50:31 | have something very similar. OK? can have very similar antigens and produce |
|
|
50:36 | same response. This is a phenomenon um cross reaction. OK. Cross |
|
|
50:47 | antibodies. OK. Now, that actually have, that can be a |
|
|
50:50 | edged sword because we'll learn that there's uh pathogens that get in your |
|
|
50:58 | They may have antigens similar to your molecules. And then you produce antibodies |
|
|
51:04 | the pathogen, but then you produce to your own tissues, right? |
|
|
51:08 | condition that can occur. There's some diseases that produce that effect. Rheumatic |
|
|
51:14 | is one of those. So sometimes doesn't always work in your favor. |
|
|
51:19 | ? Um But again, it's all antibody engine binding recognition and binding. |
|
|
51:25 | . I said we'll learn about this the semester. So here I put |
|
|
51:29 | one in, this is one of uh pet peeves is the, is |
|
|
51:34 | misuse of the word sterilization, So I put this one in |
|
|
51:39 | Which sentence below is correct. Oh That I even open that |
|
|
52:08 | I said, OK, so somebody at me when I do that. |
|
|
52:11 | tend to do that sometimes. So yell at me. OK. |
|
|
52:38 | Let's speed this up a little bit 1312. OK. Um OK. |
|
|
52:58 | Who answered? Um oops who answered who answered C oh, there's only |
|
|
53:12 | of you. I know who answered anybody want to pass up? Let's |
|
|
53:21 | . I know how to find I'm sneaky here. Uh See. |
|
|
53:27 | it this one? Yeah. Who C Tess Chan where Tess chan. |
|
|
53:38 | . Come on. Is that Ok. Are you sure? |
|
|
53:44 | who's Tess Tess? You're right. are you? Ok. So, |
|
|
53:51 | , what is, thank you uh, raising hand. So, |
|
|
53:55 | it a completely random guess, or knew it disinfection? Is, is |
|
|
54:10 | what, how do you use that ? If you're going to disinfect |
|
|
54:14 | it only applies to what? And then a bench top, |
|
|
54:19 | doorknob ahead. Right. So, um you're, you're like I |
|
|
54:23 | you're right. So it's, it's you, if uh you sterilize, |
|
|
54:27 | my arm was sterilized during this, arm would probably be not there |
|
|
54:31 | OK? Um If it was I was put in an autoclave, |
|
|
54:35 | ? So I'm gonna come out OK. Uh If I have a |
|
|
54:39 | sterilizing agent, it's gonna be so that it's like flesh of me falling |
|
|
54:43 | , right? Uh It'd be but it wouldn't be functional, |
|
|
54:46 | So, um this infection is uh mentioned, right? Inanimate objects, |
|
|
54:52 | ? So for sterilization, disinfectants, gonna be much harsher whether it's chemical |
|
|
55:00 | , what have you uh processed to, to, to do the |
|
|
55:05 | vector of sterilization. So, sterilization if you sterilize something, if I |
|
|
55:10 | this two square inch area on this , OK. I've sterilized it and |
|
|
55:17 | means there's no detectable cell spore or on that area, it's all gone |
|
|
55:25 | . OK. Um This infection um obviously disinfection reduces levels, but you |
|
|
55:33 | go down to zero. Ok. , you know when you have a |
|
|
55:38 | , just look on the bottle of or what have you, you'll see |
|
|
55:41 | the label, uh certain test organisms they're tested against, right? Specific |
|
|
55:48 | , viral bacterial. And they say against ABC DEF strains, right? |
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55:54 | proven to be 99.99% effective, 99.99% . You, you're not going to |
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56:02 | . You still have let things OK? Uh So the correct term |
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56:10 | that is antisepsis. OK. antisepsis is using chemicals or other that |
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56:20 | living tissue, your skin can OK. Beta dyne kind of brownish |
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56:27 | . You might see in the black office um uh the Isopropyl alcohol, |
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56:33 | what the swab is, right? these are kind of, these are |
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56:35 | we call anesthetics you can put on skin and that's, that's what it |
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56:39 | . OK. So uh remember that you go to lab. So in |
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56:45 | and you, you taking the ethanol you put it on the countertop, |
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56:50 | disinfecting it, you're not sterilizing OK? Um OK. Showing growth |
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56:56 | unwanted microbes. So, disinfectants and we just talked about those. Um |
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57:04 | and just the two names are you know, semi Weis and |
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57:07 | Lister uh used uh I forget what chemical was, but it was um |
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57:14 | surgical instruments is what he did um . So both of them similar |
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57:18 | hand washing to reduce um infection. and it, it really had a |
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57:23 | effect, do doing those things in of minimizing post-operative infections and, and |
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57:30 | like that. Ok. Antibiotics, course, we don't know about |
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57:34 | So remember that antibiotics are, are produced. Of course, nowadays, |
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57:38 | , we s we can synthesize these , we can do chemical modifications on |
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57:43 | to kind of tweak their activity and , but we still go out and |
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57:47 | how to find new ones as OK. Uh Obviously penicillin. Uh |
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57:52 | so any kind of inhibitory action by will be seen by kind of this |
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57:58 | . So penicillin, mold sitting there you can see a streak plate of |
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58:02 | that there's an area around that mold , there's no growth occurring because the |
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58:10 | chemical it's releasing is diffusing out and the growth, right? So, |
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58:14 | know, oh, that must be kind of effect. And of |
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58:17 | they've discovered penicillin that way. But , we know nowadays of antibiotic |
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58:23 | which is a major problem. And not only just bacteria resistant to |
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58:29 | single type of antibiotic, but multi types, very difficult to deal |
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58:34 | OK. Don't worry about having to different mechanisms of, of resistance, |
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58:39 | ? Just put this up there just visual purposes. Uh We'll talk about |
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58:43 | later in the semester. But um know, they target for antibiotics and |
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58:48 | reason why you can get resistance because have, they have single targets in |
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58:54 | cell, whether it's affecting a component protein synthesis or an enzyme involved in |
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58:59 | cell wall synthesis or an enzyme involved uh replication. So they have single |
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59:06 | , right. So it's not that considering how bacteria, for example can |
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59:12 | so fast. They can acquire mutations to get just one mutation to counteract |
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59:16 | effect of antibiotic is not that Really? Ok. Uh What you |
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59:22 | though is to have exposure to the . That's where the, that's where |
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59:26 | issue comes in is misuse of creates that environment to produce resistance. |
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59:33 | Antibiotics are everywhere, right? Just a sample of wastewater and you have |
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59:38 | . We have a bunch of those in there, right? The food |
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59:41 | eat, right? We inject chickens cows with antibiotics, right? To |
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59:45 | for food production because when you're growing animals in well in closed quarters, |
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59:52 | say, ok, a bazillion chickens a coop, right? Uh disease |
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59:57 | pretty quick, right? If if one of those is infected, |
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60:01 | you gotta give them antibiotics to minimize , right? And so of course |
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60:04 | you, you ingest that and then contribute the problem as well. |
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60:08 | So resistance kind of come about in various ways, right? |
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60:12 | they can uh pump the antibiotics they can change the target slightly. |
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60:17 | the antibiotic can't bind to it. can um uh modify, modify the |
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60:23 | and pop them out, uh produce that maybe destroy the antibiotic altogether, |
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60:28 | ? So it's a war back and between us and them and trying to |
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60:33 | on top. OK. So the last part here, I'm gonna dimension |
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60:40 | will correlate uh I, I put last because it will correlate us going |
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60:46 | the next couple of weeks, which all about metabolism. OK. So |
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60:52 | a any questions about antibiotic resistance or ? OK. OK. So uh |
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60:59 | ecology. So this, so until time as I mentioned, right? |
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61:06 | , you could, you could grow on a plate, you could roll |
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61:09 | liquid, uh you can isolate But what most we're dealing with if |
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61:16 | all we're dealing with were types that grow on something like a beef |
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61:22 | Think of Campbell's chicken noodle soup, chicken beef broth, whatever like that's |
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61:29 | complex, organic material and lots of can grow on it. OK? |
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61:34 | that's what most microbiologists were dealing If not all of them, we're |
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61:37 | types that would grow on that. ? A very rich medium we call |
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61:42 | . OK. These guys when the at al um discovered these types that |
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61:49 | completely different in terms of metabolism. . So uh they could use food |
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61:55 | for energy that were inorganic. H two S ammonia, um |
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62:04 | right? Things as you go. goodness. How can you get energy |
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62:06 | that OK. This is what we the litho troops. OK. So |
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62:12 | means a rock eater. OK. are inorganic materials for the most |
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62:18 | I think. Um and so synonymous that term is this one chemo |
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62:25 | So they're both synonymous liso troph, autotroph. OK. And so the |
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62:31 | chemo autotroph, you know chemo and . So the chemo part tells you |
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62:37 | gets this energy from chemical reactions, oxidation, OK. As opposed to |
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62:44 | , you have chemo, we're gonna photo, right? Photo is using |
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62:47 | , right? So chemo is using non light chemical reactions to get |
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62:51 | The autotroph part because you can have autotroph, photo heterotrophic, chemo |
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62:57 | right? So the hetro part points what is the what is the sea |
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63:06 | , right? Um Is it co2 it something more complex like C six |
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63:15 | 1206 glucose, something like that, ? So two fundamentally different things |
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63:22 | OK. And that's your autotroph hetero . OK. Uh That will definitely |
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63:31 | be the last time you hear that the next three weeks. So you're |
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63:34 | get sick of it by the Um Anyhoo. So uh again, |
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63:39 | inorganic sources, that's what lithos how they do this. Well, |
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63:43 | can imagine it might be kind of to grow on a plate because they |
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63:46 | didn't know what they actually did first to take a soil sample. |
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63:52 | And they uh applied like I think ammonia, right? So you have |
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63:58 | soil, take a, take take a pan of soil and you |
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64:03 | it in an enclosed chamber and you hydrogen gas, let's say, |
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64:09 | then you monitor it every day and notice, hm, hydrogen gas is |
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64:14 | away. What's that all about? ? And so you then take that |
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64:21 | , same soil and you autoclave you sterilize it. OK? You |
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64:27 | any living thing in there. Repeat experiment. Put H two in |
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64:30 | H two is not disappearing, it's there, you know. Hm. |
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64:34 | must be something in the dirt that's hydrogen gas to do some kind of |
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64:41 | products. What in the heck is all about? Right? And micros |
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64:44 | use H two. That sounds right? So that's what led them |
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64:48 | this path. And so they use column. OK? Which is really |
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64:53 | um I actually did one of these times by the there's a pond over |
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64:58 | by the Technology Center. I think took some mud from the, from |
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65:03 | edge and put it in this And the same thing happened. I |
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65:06 | these different layers with it took like months before you actually saw something, |
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65:10 | in any case, so you got mud of course, is a source |
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65:14 | microbes, right? Bacteria. And course, it's gonna be all different |
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65:17 | in there. It's not a pure obviously. But then you add things |
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65:21 | pretty basic, right? Shredded So news newspaper is the source of |
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65:28 | , remember what you, it's a of, well guess it's carbon |
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65:36 | right? So clos papers made of but C is a carbon. |
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65:41 | It's a type of sugar. And you have that, then you add |
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65:45 | like calcium salts of sulfate. I think they added like eggs, |
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65:49 | are rich in sulfur, like eggs egg shells would have eggs, shells |
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65:53 | have carbonate and calcium salts in And you know it put it all |
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65:58 | that sit on the shelf. Light IOT. And so um so |
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66:03 | uh is a source. We have carbon sources. We have this, |
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66:08 | the newsprint newspaper. OK. Sly . And then you have the car |
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66:15 | which can be converted to uh CO2 the micro pass the right enzyme mean |
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66:22 | that CO2 and then that's that, your autotroph source, right? |
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66:26 | And so you could grow then these metabolic types, right? Autotrophs, |
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66:31 | and the same thing. And so see is a layering tiers of |
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66:37 | right? Top bottom, right? again, so that would be a |
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66:42 | of oxygen as well. More oxygen front on top, none as you |
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66:47 | to the bottom, right? So gradient of 02. OK. And |
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66:51 | what you get different types? So that can utilize the um um sulfate |
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66:59 | provided, right? And reduce that H two S that can be used |
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67:05 | others as a source of energy oxidizing to uh elemental sulfur. Um You |
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67:12 | the H two being utilized as a . And so these are all anaerobic |
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67:20 | down there processes. You have santa and these are types that are photos |
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67:27 | just like a plant, right? water to oxygen, utilize sunlight. |
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67:33 | Big CO2. OK. And you have uh other types of photosynthetic bacteria |
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67:39 | can use other things in water like , for example. OK. And |
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67:44 | so this opens up this whole new of microbial activity that didn't even think |
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67:49 | it existed, right? It really to the diversity of metabolisms you see |
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67:56 | among the prokaryotes. OK? And we'll learn that this process here or |
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68:03 | a nutshell. OK? You I just, there's a question coming |
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68:08 | , you have um a source, ? And you have a source that |
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68:19 | oxidized, it's called a food right? That becomes oxidized. |
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68:25 | And then, and as it becomes , it releases electrons, right? |
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68:30 | then goes through an electron transport Don't worry about writing this down. |
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68:34 | And then those electrons are tra traveled here to a terminal acceptor. |
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68:44 | And so for you, that's OK? And that becomes water. |
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68:51 | . So uh it's all about electrons passing through and those when you transfer |
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68:57 | and releasing energy and the energy is then to pump protons out. |
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69:05 | And then you harness that right? having this thing called uh A T |
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69:13 | TP ace. OK? Because as protons go down, they release energy |
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69:20 | they use that to make a OK. So in a nutshell, |
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69:25 | basically describe to you chapter 13 and , right? So we're done, |
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69:28 | know, but that's, you that's, that's what we're gonna be |
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69:31 | on in the next couple, three , not just that, but you |
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69:34 | , kind of fleshing it all OK? But there in the microbial |
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69:40 | , you can have things other than at the end that it can respire |
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69:44 | I mentioned nitrate respiration, right? can have different food sources, it |
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69:48 | be glucose, it can be something . So all the front and back |
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69:52 | can be mixed and matched in different . OK? And that's what gives |
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69:57 | what they use, what they use and what they use here at the |
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70:04 | tells you what kind of metabolic microbe is, right? Is the photo |
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70:09 | is the chemo water trope is this is the that right. So |
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70:14 | , and this collectively is respiration. ? That process, OK? Can |
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70:21 | aerobic or anaerobic. OK? It be using an inorganic source, using |
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70:27 | organic source. OK. So that's which is completely different from what we |
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70:34 | in the past year. So what the yet fermentation is involves nothing |
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70:45 | what I just mentioned not more basic or simple, right? So |
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70:53 | like I said, I describe to what we'll be talking about in the |
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70:56 | two weeks. So if you didn't this down, don't worry about |
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70:59 | OK? We'll, you, we're go through it and nausea. |
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71:04 | So let's um let me do let me erase um this. |
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71:12 | So here's uh li like trophies in for energy. Here's kind of a |
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71:17 | . OK. Um ammonia, ammonium , potassium phosphate, magnesium chloride, |
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71:24 | chloride, iron, sulfate, ferric . However, uh we provide adequate |
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71:30 | create at the right temp maybe add couple of vitamins, right? Um |
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71:34 | . So we got that recipe. the question is what else does it |
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71:40 | ? OK. Um Many ideas, we're supplying it at this point. |
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71:47 | there something else we need to What kind of your kind of, |
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71:52 | based life are you? Are you based life? Carbon based life, |
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72:02 | ? You are carbon based life. don't see, do you see a |
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72:13 | with? See, right. We calcium, we have chloride but do |
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72:19 | see something with ac in it? . So we need to have something |
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72:24 | um for a litho trope, it's be CO2. OK. We need |
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72:30 | have co two. The missing ingredient this case would basically come from the |
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72:34 | . OK. Co two in the or we supply a carbonate molecule and |
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72:39 | will convert to CO two. But that's what an nope is. |
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72:43 | is. No. And so whatever life form you are, you've |
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72:48 | have this, right? Because that's you make your molecules of, |
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72:52 | DNA RN A proteins, carbs these are all based on AC C |
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73:00 | framework, carbon framework and you add to it, right? So |
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73:04 | you can't make those unless you're, eating carbon and um that's what we |
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73:10 | , we get ours from eating where gonna eat for lunch today. That's |
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73:13 | be a carbon source for you. ? Um You can't use CO2, |
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73:19 | ? Um You can try it, ? But you're gonna die. |
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73:25 | So you need to have organic OK? And it's a kind of |
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73:28 | dumb thing to say, well, is not organic, is, is |
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73:32 | . No, it's not, it organic but it's the most, it's |
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73:35 | most simplest organic carbon form, You can't take CO2, right? |
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73:41 | looks like this. You can't break down, right? Life can't break |
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73:46 | down and get energy from it, ? You can only build with |
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73:50 | right? So you build complex molecules this, right? C six H |
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73:58 | . And when you're building stuff, takes lots of energy, right? |
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74:01 | you're making something small into something big so you need energy to do |
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74:06 | And where does the litho trope get from? From oxidizing things like |
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74:12 | Where does the plant get it from . OK. That's the way the |
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74:17 | works, right? You're an autotroph a head atrop. OK. So |
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74:21 | the um so with this discovery of litho troops and these various metabolisms, |
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74:28 | can then see how their metabolisms are in the cycling of the various |
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74:35 | right? So in an ecosystem, you gotta have these supplied, |
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74:40 | And in many cases, it's right? So we actually have a |
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74:44 | , a basic uh yeah, basic cycle, right? So you have |
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74:50 | , right? You have consumers up . This is a nitrogen cycle. |
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74:55 | talk about that later, but the atrophy here is right on the |
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75:02 | on the bottom one, right? . This is the part that's the |
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75:06 | trophy, right? They're taking these , breaking them down and getting energy |
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75:12 | it. That's what lit litho troph do. OK. Um So the |
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75:17 | autotroph thing. So I know, me go doctor. That is so |
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75:21 | . I learned this stuff in junior . OK. Trust me, I |
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75:26 | Kier is doing this that you you know it, then I'll get |
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75:29 | and what's not, right? So it. OK. Um And |
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75:36 | you know, obviously cycling, autotrophs, hetero trope, we eat |
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75:41 | up CO2, right? And that's goes in the atmosphere and that's what |
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75:44 | can use. OK. So certainly , right? Fungi, uh bacteria |
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75:49 | the soil breaking down that organic material elements and components that others can |
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75:56 | right? So uh where are microbes in this cycle on one spot or |
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76:08 | ? Everywhere they're in all levels, ? Your bacteria that sort of synthesize |
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76:13 | bacteria that consume your bacteria that decompose everywhere, right? Ubiquitous. |
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76:20 | Um So autotrophs are producers. Header are consumers. OK. So you're |
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76:31 | hetro, you're a consumer. So um I'll come back to that. |
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76:39 | do that the first thing that, first thing next time. Let's look |
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76:43 | the after this is the same question had earlier. So let's uh let's |
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76:47 | that real quick. OK. Same . So let's see if you change |
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76:56 | mind here. Um So these things were talking about the hetero trope autotroph |
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77:02 | troops, right? Uh We'll begin get in, get into that stuff |
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77:06 | week. OK? But remember, be scared or intimidated by what you |
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77:11 | in chapter 13, right? With the reactions and this and that I'm |
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77:16 | condense that for you. OK? you an expert at it. |
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77:24 | Mhm. Yeah. OK. Calm . Not. Mm That jumped up |
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77:50 | a hurry. OK. Uh Let's . Went from the correct answer. |
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78:01 | OK. A is wrong. B wrong. C is wrong. B |
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78:09 | wrong. E is wrong. F F is the correct answer. So |
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78:16 | went to 53 on that one. . All right. I'll, I |
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78:20 | post Monday's question. Clicker questions. do that. I forgot So you'll |
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78:23 | all these extras will be available to . So don't forget the uh, |
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78:28 | on Friday start opens Friday. See you all next |
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